Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS02685 and RALBFv3_RS02690 are separated by 60 nucleotidesRALBFv3_RS02690 and RALBFv3_RS02695 are separated by 186 nucleotidesRALBFv3_RS02695 and RALBFv3_RS02700 are separated by 76 nucleotidesRALBFv3_RS02700 and RALBFv3_RS02705 are separated by 163 nucleotides RALBFv3_RS02685: RALBFv3_RS02685 - bifunctional 2-methylcitrate dehydratase/aconitate hydratase, at 596,914 to 598,365 _RS02685 RALBFv3_RS02690: RALBFv3_RS02690 - aconitate hydratase AcnA, at 598,426 to 601,131 _RS02690 RALBFv3_RS02695: RALBFv3_RS02695 - hypothetical protein, at 601,318 to 601,563 _RS02695 RALBFv3_RS02700: RALBFv3_RS02700 - DUF2863 domain-containing protein, at 601,640 to 602,851 _RS02700 RALBFv3_RS02705: RALBFv3_RS02705 - ABC transporter substrate-binding protein, at 603,015 to 604,643 _RS02705
Group Condition RALBFv3_RS02685 RALBFv3_RS02690 RALBFv3_RS02695 RALBFv3_RS02700 RALBFv3_RS02705
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.9 N.D. +0.6 -2.5 -0.4
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.7 N.D. -1.2 -1.8 +0.4
in planta tomato xylem local (total stem) -1.1 N.D. -0.9 -0.9 -0.2
in planta tomato xylem local (total stem) -2.0 N.D. +0.9 -2.0 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.8 N.D. -1.2 -1.1 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.3 N.D. -0.3 -0.9 -0.1
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.9 N.D. -0.7 -0.6 -0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.1 N.D. -1.5 -0.8 -0.4
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.5 N.D. -1.5 -0.4 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.9 N.D. -0.8 -0.4 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.2 N.D. -0.2 -1.7 -0.1
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.3 N.D. -0.8 -0.3 -0.8
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.8 N.D. -0.2 -1.1 -0.0
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.1 N.D. -1.1 +0.0 -1.0
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.4 N.D. -1.1 -0.8 +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.7 N.D. -1.1 -0.4 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 N.D. -1.1 -1.0 +0.5
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.6 N.D. -0.0 -0.4 +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.8 N.D. -0.8 -0.5 +0.4
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 N.D. -0.4 -1.1 +0.5
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.9 N.D. +0.6 -1.0 +0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 N.D. +0.6 -1.7 -0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.3 N.D. +1.0 -1.3 -0.5
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 N.D. -0.3 -0.7 +0.5
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 N.D. +0.6 -1.2 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.5 N.D. -0.4 -0.7 +0.6
in planta tomato xylem local (total stem) -1.0 N.D. +0.2 -0.3 +0.8
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 N.D. -0.4 -0.4 +1.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.4 N.D. +0.9 -0.7 -0.5
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.2 N.D. +0.7 -0.1 +0.9
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RALBFv3_RS02685
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RALBFv3_RS02690
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RALBFv3_RS02700
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