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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS02370 and RALBFv3_RS02375 are separated by 7 nucleotides
RALBFv3_RS02375 and RALBFv3_RS02380 overlap by 4 nucleotides
RALBFv3_RS02380 and RALBFv3_RS02385 are separated by 46 nucleotides
RALBFv3_RS02385 and RALBFv3_RS02390 overlap by 4 nucleotides
RALBFv3_RS02370: RALBFv3_RS02370 - ABC transporter substrate-binding protein, at 527,238 to 528,806
_RS02370
RALBFv3_RS02375: RALBFv3_RS02375 - Long-chain fatty-acyl-CoA hydrolase, at 528,814 to 530,724
_RS02375
RALBFv3_RS02380: RALBFv3_RS02380 - alkylhydroperoxidase, at 530,721 to 531,314
_RS02380
RALBFv3_RS02385: RALBFv3_RS02385 - xanthine dehydrogenase family protein molybdopterin-binding subunit, at 531,361 to 533,658
_RS02385
RALBFv3_RS02390: RALBFv3_RS02390 - (2Fe-2S)-binding protein, at 533,655 to 534,122
_RS02390
Group
Condition
RALBFv3
_RS02370
RALBFv3
_RS02375
RALBFv3
_RS02380
RALBFv3
_RS02385
RALBFv3
_RS02390
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.5
-0.3
+0.3
-0.6
-0.5
m63_quarter_strength
M63_quarter_strength
-0.1
+0.3
-0.4
+0.1
-0.8
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
-0.2
+0.0
+0.2
+0.1
-1.1
cpg
CPG
-0.0
+0.0
+0.2
+0.3
-1.4
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.1
+0.1
+0.5
-0.3
-0.8
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.2
+0.4
-0.1
+0.1
-0.7
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.2
-0.2
+0.7
-0.1
-0.3
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
+0.1
+0.8
-0.1
-0.9
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.3
+0.2
+0.5
-0.0
-0.5
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.2
+0.3
+0.5
-0.0
-0.4
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days
+0.1
+0.3
+0.6
+0.1
-0.4
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.5
+0.3
-0.1
-0.3
+0.4
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.5
+0.0
+1.0
+0.1
-0.6
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.3
+0.3
+0.3
-0.3
+0.5
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.4
+0.2
+0.7
-0.1
+0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.0
+0.1
+0.7
-0.1
+0.8
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.1
+0.2
+0.7
+0.4
-0.1
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.3
+0.1
+0.7
+0.4
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.4
+0.3
+0.6
+0.0
+0.1
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
+0.1
+0.3
+1.3
+0.2
-0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.3
+0.4
+0.3
+0.0
+0.6
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
+0.3
+0.2
+0.0
+1.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.4
+0.4
+0.5
+0.1
+0.2
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.3
+0.4
+0.5
+0.4
-0.0
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.1
+0.4
-0.0
+0.2
+0.9
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.1
+0.1
+0.9
+0.5
+0.1
in planta
tomato xylem local (total stem)
+0.7
+0.4
+0.4
+0.2
+0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
+0.3
+0.5
+0.1
+0.9
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.5
+0.4
+1.7
+0.3
+0.1
in planta
tomato xylem local (total stem)
+0.3
+0.5
+1.0
+0.0
+1.5
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RALBFv3_RS02380
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RALBFv3_RS02390
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