Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 100 experiments or choose conditions or try the comparative fitness browser

500 ntRALBFv3_RS01830 and RALBFv3_RS01835 are separated by 155 nucleotidesRALBFv3_RS01835 and RALBFv3_RS01840 are separated by 38 nucleotidesRALBFv3_RS01840 and RALBFv3_RS01845 are separated by 211 nucleotidesRALBFv3_RS01845 and RALBFv3_RS01850 are separated by 66 nucleotides RALBFv3_RS01830: RALBFv3_RS01830 - CoA transferase subunit A, at 408,114 to 408,812 _RS01830 RALBFv3_RS01835: RALBFv3_RS01835 - LuxR family transcriptional regulator, at 408,968 to 409,513 _RS01835 RALBFv3_RS01840: RALBFv3_RS01840 - NAD(P)-dependent oxidoreductase, at 409,552 to 410,337 _RS01840 RALBFv3_RS01845: RALBFv3_RS01845 - electron transfer flavoprotein-ubiquinone oxidoreductase, at 410,549 to 412,237 _RS01845 RALBFv3_RS01850: RALBFv3_RS01850 - chorismate synthase, at 412,304 to 413,404 _RS01850
Group Condition RALBFv3_RS01830 RALBFv3_RS01835 RALBFv3_RS01840 RALBFv3_RS01845 RALBFv3_RS01850
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -3.1 -0.1 -0.6 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -3.0 +0.3 -0.2 N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -1.7 -0.1 -0.2 N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.9 +0.1 +0.1 N.D. N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -1.2 -0.4 +0.7 N.D. N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -1.0 -0.6 +0.9 N.D. N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.9 +0.8 +1.4 N.D. N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -0.1 +1.2 N.D. N.D.
m63_quarter_strength M63_quarter_strength -0.0 +0.4 +1.1 N.D. N.D.
in planta tomato xylem local (total stem) +0.3 -0.1 +1.3 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.4 +0.8 N.D. N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.1 +0.8 +0.8 N.D. N.D.
in planta tomato xylem local (total stem) +0.0 -0.2 +1.8 N.D. N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.4 +0.1 +1.1 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.4 +1.0 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.4 +0.8 N.D. N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.3 +1.1 N.D. N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.3 +0.6 +0.8 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.6 +0.9 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 +0.6 +1.0 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 +0.9 +0.7 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.5 +0.7 +0.7 N.D. N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.2 +0.2 +1.5 N.D. N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.1 +0.5 +1.5 N.D. N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.0 +0.7 +1.5 N.D. N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.1 +1.1 +1.0 N.D. N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.3 +2.2 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 +1.0 +1.0 N.D. N.D.
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.3 +0.8 +1.8 N.D. N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 +0.4 +2.5 N.D. N.D.
remove
RALBFv3_RS01830
plot		 remove
RALBFv3_RS01835
plot		 remove
RALBFv3_RS01840		 remove
RALBFv3_RS01845
plot		 remove
RALBFv3_RS01850
plot