Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS01505 and RALBFv3_RS01510 are separated by 296 nucleotidesRALBFv3_RS01510 and RALBFv3_RS01515 are separated by 36 nucleotidesRALBFv3_RS01515 and RALBFv3_RS01520 overlap by 17 nucleotidesRALBFv3_RS01520 and RALBFv3_RS01525 are separated by 15 nucleotides RALBFv3_RS01505: RALBFv3_RS01505 - class I poly(R)-hydroxyalkanoic acid synthase, at 339,018 to 340,814 _RS01505 RALBFv3_RS01510: RALBFv3_RS01510 - hypothetical protein, at 341,111 to 341,329 _RS01510 RALBFv3_RS01515: RALBFv3_RS01515 - peptidoglycan editing factor PgeF, at 341,366 to 342,172 _RS01515 RALBFv3_RS01520: RALBFv3_RS01520 - RluA family pseudouridine synthase, at 342,156 to 343,268 _RS01520 RALBFv3_RS01525: RALBFv3_RS01525 - outer membrane protein assembly factor BamD, at 343,284 to 344,117 _RS01525
Group Condition RALBFv3_RS01505 RALBFv3_RS01510 RALBFv3_RS01515 RALBFv3_RS01520 RALBFv3_RS01525
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.5 +0.0 -1.5 -3.4 N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -3.8 +0.0 -0.2 -2.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.4 -0.3 -0.2 -3.3 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -2.2 +0.3 -0.4 -3.8 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -2.1 -0.5 +0.5 -3.3 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -1.8 +0.5 +0.1 -3.8 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -4.0 +0.3 -0.4 -0.9 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -2.8 -1.4 +0.4 -1.1 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -2.4 -0.7 +0.5 -2.1 N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.8 -2.3 +1.0 -1.6 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -2.5 -0.9 +0.4 -1.7 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.7 -2.6 +0.2 -0.7 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -2.1 -1.8 -0.8 +0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.0 -1.4 +0.2 -1.3 N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -3.0 +0.5 -0.7 -1.2 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 -1.5 -0.4 -2.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.3 +0.5 -0.3 -3.1 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.8 -0.7 +0.5 -1.1 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -3.0 +0.0 +0.9 -1.8 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -2.5 -1.4 +0.5 -0.0 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.1 -0.6 +0.8 -1.5 N.D.
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.5 -2.0 +0.9 -0.6 N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.5 -2.1 +0.5 -0.2 N.D.
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -2.5 +1.1 +0.8 -2.3 N.D.
in planta tomato xylem local (total stem) -2.4 -0.8 +1.0 -0.6 N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -1.6 +0.9 -0.5 -1.4 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -2.3 +1.2 +0.7 -1.5 N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 -1.7 +2.0 -0.0 N.D.
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.2 +0.8 +1.5 -0.0 N.D.
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -1.7 +2.6 -0.1 +0.7 N.D.
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