Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 100 experiments or choose conditions or try the comparative fitness browser

500 ntRALBFv3_RS01180 and RALBFv3_RS01185 are separated by 105 nucleotidesRALBFv3_RS01185 and RALBFv3_RS01190 are separated by 22 nucleotidesRALBFv3_RS01190 and RALBFv3_RS01195 overlap by 1 nucleotidesRALBFv3_RS01195 and RALBFv3_RS01200 are separated by 41 nucleotides RALBFv3_RS01180: RALBFv3_RS01180 - YdiU family protein, at 265,071 to 266,660 _RS01180 RALBFv3_RS01185: RALBFv3_RS01185 - peptide-methionine (R)-S-oxide reductase, at 266,766 to 267,152 _RS01185 RALBFv3_RS01190: RALBFv3_RS01190 - septation protein A, at 267,175 to 267,735 _RS01190 RALBFv3_RS01195: RALBFv3_RS01195 - BolA family transcriptional regulator, at 267,735 to 268,007 _RS01195 RALBFv3_RS01200: RALBFv3_RS01200 - peptidyl-prolyl cis-trans isomerase, at 268,049 to 268,846 _RS01200
Group Condition RALBFv3_RS01180 RALBFv3_RS01185 RALBFv3_RS01190 RALBFv3_RS01195 RALBFv3_RS01200
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.9 +0.1 N.D. -1.1 -1.8
in planta tomato xylem local (total stem) -0.2 -0.5 N.D. -0.2 -2.5
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.0 -0.2 N.D. -0.8 -1.7
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.9 -0.0 N.D. -0.3 -1.3
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.3 N.D. -1.0 -1.3
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.3 -1.2 N.D. -0.0 -0.9
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.6 +0.3 N.D. -0.4 -1.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.2 -0.3 N.D. -0.5 -1.0
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 -1.3 N.D. -0.0 -0.5
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.4 +0.3 N.D. -0.0 -0.8
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.3 -0.9 N.D. +1.0 -0.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.9 +0.5 N.D. +0.0 +0.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.3 -0.5 N.D. -0.2 +0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 -0.3 N.D. +1.0 -1.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.1 -0.2 N.D. +1.0 -0.7
smsa no antibiotic control SMSA no antibiotic control +0.1 -0.5 N.D. -0.5 +0.9
cpg no stress control CPG no stress control +0.0 -0.3 N.D. -0.9 +1.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.6 +0.2 N.D. -0.4 +0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.1 -0.3 N.D. -0.4 +0.7
in planta tomato xylem local (total stem) +0.2 -1.1 N.D. +1.5 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.5 N.D. +0.5 +0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.5 N.D. +0.7 +0.2
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.5 -0.8 N.D. +0.6 +0.2
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 +0.2 N.D. +0.7 -0.5
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.9 -0.3 N.D. -0.1 +0.4
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.2 -0.4 N.D. +0.1 +1.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 -1.0 N.D. +1.3 +0.9
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.4 N.D. +0.6 +0.4
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.2 N.D. +2.3 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 -0.4 N.D. +1.5 +1.1
remove
RALBFv3_RS01180
plot		 remove
RALBFv3_RS01185
plot		 remove
RALBFv3_RS01190		 remove
RALBFv3_RS01195
plot		 remove
RALBFv3_RS01200
plot