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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS01165 and RALBFv3_RS01170 are separated by 121 nucleotides
RALBFv3_RS01170 and RALBFv3_RS01175 are separated by 214 nucleotides
RALBFv3_RS01175 and RALBFv3_RS01180 are separated by 334 nucleotides
RALBFv3_RS01180 and RALBFv3_RS01185 are separated by 105 nucleotides
RALBFv3_RS01165: RALBFv3_RS01165 - branched-chain amino acid ABC transporter permease, at 260,562 to 261,509
_RS01165
RALBFv3_RS01170: RALBFv3_RS01170 - branched-chain amino acid ABC transporter substrate-binding protein, at 261,631 to 262,884
_RS01170
RALBFv3_RS01175: RALBFv3_RS01175 - long-chain-fatty-acid--CoA ligase, at 263,099 to 264,736
_RS01175
RALBFv3_RS01180: RALBFv3_RS01180 - YdiU family protein, at 265,071 to 266,660
_RS01180
RALBFv3_RS01185: RALBFv3_RS01185 - peptide-methionine (R)-S-oxide reductase, at 266,766 to 267,152
_RS01185
Group
Condition
RALBFv3
_RS01165
RALBFv3
_RS01170
RALBFv3
_RS01175
RALBFv3
_RS01180
RALBFv3
_RS01185
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.2
+0.1
-0.0
-0.3
-0.9
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.3
+0.2
+0.1
-0.3
-1.2
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
-0.3
-0.1
-0.2
-0.4
+0.3
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
-0.2
+0.2
+0.1
-0.3
-0.5
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.3
+0.1
-0.1
-0.1
-0.6
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.0
-0.0
+0.9
-1.9
+0.5
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.4
+0.0
+0.4
-0.6
+0.3
in planta
tomato xylem local (total stem)
+0.8
-0.1
-0.0
-0.2
-0.5
in planta
tomato xylem local (total stem)
+0.3
+0.2
+0.2
+0.2
-1.1
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.0
+0.1
+0.1
+0.5
-0.8
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.2
+0.4
+0.5
-0.9
-0.0
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.3
+0.6
-0.1
+0.2
-0.3
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.1
+0.1
+0.4
-0.4
+0.3
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
+0.1
+0.2
+0.8
-0.9
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+1.1
+0.0
+0.1
+0.1
-1.0
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.0
+0.4
+0.7
+0.5
-1.3
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.3
+0.3
+0.2
-0.6
+0.2
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.7
+0.2
-0.2
+0.2
-0.4
m63_quarter_strength
M63_quarter_strength
+0.6
+0.2
+0.2
-0.1
-0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.7
+0.4
+0.1
-0.1
-0.5
in planta
Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.6
-0.0
-0.3
+0.9
-0.3
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.4
+0.6
-0.2
+0.1
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.9
+0.2
+0.1
+0.0
-0.3
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.8
+0.5
-0.4
-0.0
+0.3
in planta
tomato xylem local (total stem)
+0.3
+0.8
-0.0
+0.1
+0.1
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.4
+0.2
+0.3
+0.5
+0.2
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
+1.6
+0.1
+0.3
+0.1
-0.4
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.5
+0.7
+0.3
-0.0
+0.3
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.5
+0.5
+0.1
+0.3
+0.4
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.9
+0.5
+0.1
+0.2
+0.4
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RALBFv3_RS01175
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RALBFv3_RS01185
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