Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS01165 and RALBFv3_RS01170 are separated by 121 nucleotidesRALBFv3_RS01170 and RALBFv3_RS01175 are separated by 214 nucleotidesRALBFv3_RS01175 and RALBFv3_RS01180 are separated by 334 nucleotidesRALBFv3_RS01180 and RALBFv3_RS01185 are separated by 105 nucleotides RALBFv3_RS01165: RALBFv3_RS01165 - branched-chain amino acid ABC transporter permease, at 260,562 to 261,509 _RS01165 RALBFv3_RS01170: RALBFv3_RS01170 - branched-chain amino acid ABC transporter substrate-binding protein, at 261,631 to 262,884 _RS01170 RALBFv3_RS01175: RALBFv3_RS01175 - long-chain-fatty-acid--CoA ligase, at 263,099 to 264,736 _RS01175 RALBFv3_RS01180: RALBFv3_RS01180 - YdiU family protein, at 265,071 to 266,660 _RS01180 RALBFv3_RS01185: RALBFv3_RS01185 - peptide-methionine (R)-S-oxide reductase, at 266,766 to 267,152 _RS01185
Group Condition RALBFv3_RS01165 RALBFv3_RS01170 RALBFv3_RS01175 RALBFv3_RS01180 RALBFv3_RS01185
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.2 +0.1 -0.0 -0.3 -0.9
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.3 +0.2 +0.1 -0.3 -1.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.3 -0.1 -0.2 -0.4 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.2 +0.2 +0.1 -0.3 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 +0.1 -0.1 -0.1 -0.6
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.0 -0.0 +0.9 -1.9 +0.5
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.4 +0.0 +0.4 -0.6 +0.3
in planta tomato xylem local (total stem) +0.8 -0.1 -0.0 -0.2 -0.5
in planta tomato xylem local (total stem) +0.3 +0.2 +0.2 +0.2 -1.1
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.0 +0.1 +0.1 +0.5 -0.8
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.2 +0.4 +0.5 -0.9 -0.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.3 +0.6 -0.1 +0.2 -0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 +0.1 +0.4 -0.4 +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.1 +0.2 +0.8 -0.9 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +1.1 +0.0 +0.1 +0.1 -1.0
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 +0.4 +0.7 +0.5 -1.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.3 +0.3 +0.2 -0.6 +0.2
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.7 +0.2 -0.2 +0.2 -0.4
m63_quarter_strength M63_quarter_strength +0.6 +0.2 +0.2 -0.1 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.7 +0.4 +0.1 -0.1 -0.5
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.6 -0.0 -0.3 +0.9 -0.3
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.4 +0.6 -0.2 +0.1 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.9 +0.2 +0.1 +0.0 -0.3
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.8 +0.5 -0.4 -0.0 +0.3
in planta tomato xylem local (total stem) +0.3 +0.8 -0.0 +0.1 +0.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.2 +0.3 +0.5 +0.2
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +1.6 +0.1 +0.3 +0.1 -0.4
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 +0.7 +0.3 -0.0 +0.3
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 +0.5 +0.1 +0.3 +0.4
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.9 +0.5 +0.1 +0.2 +0.4
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