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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS01100 and RALBFv3_RS01105 are separated by 181 nucleotides
RALBFv3_RS01105 and RALBFv3_RS01110 are separated by 32 nucleotides
RALBFv3_RS01110 and RALBFv3_RS01115 are separated by 48 nucleotides
RALBFv3_RS01115 and RALBFv3_RS01120 are separated by 114 nucleotides
RALBFv3_RS01100: RALBFv3_RS01100 - 6-aminohexanoate-dimer hydrolase, at 242,171 to 243,493
_RS01100
RALBFv3_RS01105: RALBFv3_RS01105 - PaaI family thioesterase, at 243,675 to 244,109
_RS01105
RALBFv3_RS01110: RALBFv3_RS01110 - gluconate 2-dehydrogenase, at 244,142 to 244,924
_RS01110
RALBFv3_RS01115: RALBFv3_RS01115 - acyl-CoA dehydrogenase, at 244,973 to 246,841
_RS01115
RALBFv3_RS01120: RALBFv3_RS01120 - acetyl-CoA acetyltransferase, at 246,956 to 248,134
_RS01120
Group
Condition
RALBFv3
_RS01100
RALBFv3
_RS01105
RALBFv3
_RS01110
RALBFv3
_RS01115
RALBFv3
_RS01120
m63_quarter_strength
M63_quarter_strength
-0.0
N.D.
-1.2
-0.1
-1.6
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.1
N.D.
+0.2
+0.1
-2.6
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.1
N.D.
+0.8
+0.0
-2.8
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.0
N.D.
-1.3
-0.2
-0.4
in planta
Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
-0.2
N.D.
-1.3
-0.1
+0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
-0.3
N.D.
-0.5
+0.2
-0.7
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
N.D.
+0.3
-0.2
-0.9
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.2
N.D.
-0.7
-0.1
-0.4
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
-0.1
N.D.
-1.0
+0.2
-0.1
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.3
N.D.
+0.3
+0.2
-1.8
in planta
tomato xylem local (total stem)
+0.2
N.D.
-0.4
+0.4
-1.1
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
-0.0
N.D.
+0.4
+0.3
-1.5
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
N.D.
+0.3
-0.1
-1.1
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.4
N.D.
-1.3
+0.4
-0.1
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.2
N.D.
+0.4
+0.3
-1.4
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
-0.0
N.D.
+0.2
+0.2
-0.9
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.0
N.D.
+0.6
+0.0
-1.0
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.3
N.D.
-0.1
+0.3
-0.8
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-0.4
N.D.
-0.6
+0.3
+0.4
in planta
Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.3
N.D.
-0.4
+0.4
-0.4
xylem sap
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi
-0.2
N.D.
+0.6
+0.0
-0.6
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.3
N.D.
+0.9
+0.3
-0.4
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
+0.0
N.D.
+1.1
+0.2
-0.4
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.7
N.D.
+0.5
+0.1
-0.2
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.1
N.D.
+1.0
+0.4
-0.4
in planta
tomato xylem local (total stem)
+0.3
N.D.
-0.0
+0.9
+0.1
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.3
N.D.
+0.6
+0.1
+0.4
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.2
N.D.
+0.2
+0.4
+1.1
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
-0.1
N.D.
+0.5
+0.1
+1.2
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.1
N.D.
+1.4
+0.2
+0.4
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