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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS00760 and RALBFv3_RS00765 are separated by 111 nucleotides
RALBFv3_RS00765 and RALBFv3_RS00770 are separated by 67 nucleotides
RALBFv3_RS00770 and RALBFv3_RS00775 are separated by 123 nucleotides
RALBFv3_RS00775 and RALBFv3_RS00780 are separated by 33 nucleotides
RALBFv3_RS00760: RALBFv3_RS00760 - LysR family transcriptional regulator, at 173,080 to 173,991
_RS00760
RALBFv3_RS00765: RALBFv3_RS00765 - muconate cycloisomerase, at 174,103 to 175,212
_RS00765
RALBFv3_RS00770: RALBFv3_RS00770 - muconolactone delta-isomerase, at 175,280 to 175,570
_RS00770
RALBFv3_RS00775: RALBFv3_RS00775 - catechol 1,2-dioxygenase, at 175,694 to 176,614
_RS00775
RALBFv3_RS00780: RALBFv3_RS00780 - benzoate 1,2-dioxygenase large subunit, at 176,648 to 178,015
_RS00780
Group
Condition
RALBFv3
_RS00760
RALBFv3
_RS00765
RALBFv3
_RS00770
RALBFv3
_RS00775
RALBFv3
_RS00780
m63_quarter_strength
M63_quarter_strength
-0.3
-3.7
-3.0
+0.3
-0.1
m63_quarter_strength
M63_quarter_strength
-0.7
-4.5
-1.3
+0.1
+0.1
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
-1.8
-3.9
-0.2
+0.0
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.3
-0.6
-4.8
-0.6
+0.1
in planta
Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.1
-0.9
-2.7
-1.5
+0.2
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.2
-1.4
-2.5
-1.0
-0.1
in planta
tomato xylem local (total stem)
+0.0
-3.4
-1.5
+0.5
-0.3
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.1
+0.8
-5.2
-0.1
-0.1
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.4
-0.1
-3.8
-0.4
+0.1
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.6
-0.5
-3.3
-0.1
-0.0
in planta
tomato xylem local (total stem)
-0.2
+1.0
-4.6
-1.1
+0.4
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.7
-0.8
-2.4
-0.4
-0.0
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.3
+0.5
-3.9
-0.4
-0.2
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
-0.8
-1.4
-3.3
+1.1
-0.0
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
-0.5
-1.2
-3.2
+0.6
+0.0
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
+0.4
+0.9
-4.9
-0.4
-0.2
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days
-0.1
+0.0
-3.7
-0.4
+0.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
+0.3
-0.4
-2.6
-1.3
-0.1
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
-0.1
-0.7
-3.3
-0.0
+0.2
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-1.0
+0.4
-2.8
-0.5
+0.2
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
-0.3
+0.7
-3.7
-0.5
+0.2
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
+0.9
+0.1
-2.8
-1.5
-0.0
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
-1.0
-0.3
-3.0
+0.9
-0.0
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
-0.8
-0.0
-3.1
+1.2
-0.0
in planta
Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.6
+1.0
-1.9
-1.1
-0.1
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.3
+1.2
-3.2
+0.1
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet
+0.0
+1.4
-2.8
+0.2
+0.1
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
-0.2
+2.4
-2.1
-0.7
+0.1
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.9
-0.4
-2.2
+1.4
+0.2
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+1.3
+2.7
-1.8
+0.1
+0.2
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