Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS00760 and RALBFv3_RS00765 are separated by 111 nucleotidesRALBFv3_RS00765 and RALBFv3_RS00770 are separated by 67 nucleotidesRALBFv3_RS00770 and RALBFv3_RS00775 are separated by 123 nucleotidesRALBFv3_RS00775 and RALBFv3_RS00780 are separated by 33 nucleotides RALBFv3_RS00760: RALBFv3_RS00760 - LysR family transcriptional regulator, at 173,080 to 173,991 _RS00760 RALBFv3_RS00765: RALBFv3_RS00765 - muconate cycloisomerase, at 174,103 to 175,212 _RS00765 RALBFv3_RS00770: RALBFv3_RS00770 - muconolactone delta-isomerase, at 175,280 to 175,570 _RS00770 RALBFv3_RS00775: RALBFv3_RS00775 - catechol 1,2-dioxygenase, at 175,694 to 176,614 _RS00775 RALBFv3_RS00780: RALBFv3_RS00780 - benzoate 1,2-dioxygenase large subunit, at 176,648 to 178,015 _RS00780
Group Condition RALBFv3_RS00760 RALBFv3_RS00765 RALBFv3_RS00770 RALBFv3_RS00775 RALBFv3_RS00780
m63_quarter_strength M63_quarter_strength -0.3 -3.7 -3.0 +0.3 -0.1
m63_quarter_strength M63_quarter_strength -0.7 -4.5 -1.3 +0.1 +0.1
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -1.8 -3.9 -0.2 +0.0
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.3 -0.6 -4.8 -0.6 +0.1
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 -0.9 -2.7 -1.5 +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.2 -1.4 -2.5 -1.0 -0.1
in planta tomato xylem local (total stem) +0.0 -3.4 -1.5 +0.5 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 +0.8 -5.2 -0.1 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.4 -0.1 -3.8 -0.4 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.6 -0.5 -3.3 -0.1 -0.0
in planta tomato xylem local (total stem) -0.2 +1.0 -4.6 -1.1 +0.4
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 -0.8 -2.4 -0.4 -0.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.3 +0.5 -3.9 -0.4 -0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.8 -1.4 -3.3 +1.1 -0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.5 -1.2 -3.2 +0.6 +0.0
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.4 +0.9 -4.9 -0.4 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.1 +0.0 -3.7 -0.4 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.3 -0.4 -2.6 -1.3 -0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.1 -0.7 -3.3 -0.0 +0.2
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.0 +0.4 -2.8 -0.5 +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.3 +0.7 -3.7 -0.5 +0.2
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.9 +0.1 -2.8 -1.5 -0.0
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -1.0 -0.3 -3.0 +0.9 -0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.8 -0.0 -3.1 +1.2 -0.0
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.6 +1.0 -1.9 -1.1 -0.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 +1.2 -3.2 +0.1 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.0 +1.4 -2.8 +0.2 +0.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.2 +2.4 -2.1 -0.7 +0.1
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.9 -0.4 -2.2 +1.4 +0.2
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.3 +2.7 -1.8 +0.1 +0.2
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