Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS23585 and RALBFv3_RS00590 are separated by 19 nucleotidesRALBFv3_RS00590 and RALBFv3_RS00595 are separated by 107 nucleotidesRALBFv3_RS00595 and RALBFv3_RS00600 are separated by 4 nucleotidesRALBFv3_RS00600 and RALBFv3_RS00605 overlap by 4 nucleotides RALBFv3_RS23585: RALBFv3_RS23585 - hypothetical protein, at 131,757 to 132,021 _RS23585 RALBFv3_RS00590: RALBFv3_RS00590 - MBL fold metallo-hydrolase, at 132,041 to 132,955 _RS00590 RALBFv3_RS00595: RALBFv3_RS00595 - LysR family transcriptional regulator, at 133,063 to 133,965 _RS00595 RALBFv3_RS00600: RALBFv3_RS00600 - MFS transporter, at 133,970 to 135,173 _RS00600 RALBFv3_RS00605: RALBFv3_RS00605 - type II toxin-antitoxin system HipA family toxin, at 135,170 to 136,507 _RS00605
Group Condition RALBFv3_RS23585 RALBFv3_RS00590 RALBFv3_RS00595 RALBFv3_RS00600 RALBFv3_RS00605
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.4 -0.8 +0.0 -0.7 -1.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.8 -0.6 +0.1 -0.2 -0.7
in planta Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.1 +0.2 -0.3 -0.4 -0.3
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.1 -1.0 -0.1 +0.3 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.8 -0.4 -0.1 +0.1 +0.4
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.8 -0.3 -0.4 -0.4 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.3 -0.2 +0.2 +0.6 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.2 -0.0 +0.2 +0.3 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.7 -0.6 +0.1 +0.7 +0.5
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -1.4 -0.4 +0.2 +0.7 +1.2
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -1.4 +1.0 +0.1 -0.1 +1.0
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.9 +0.0 +0.6 +0.7 +1.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.6 +0.6 -0.5 +0.2 +1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 -0.4 +0.3 +0.3 +0.9
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.1 -0.8 +0.3 +0.7 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.1 +0.8 +0.1 +0.7 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 +0.6 +0.3 +0.0 +0.9
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.6 +0.5 -0.1 -0.3 +0.4
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi +0.3 -0.4 +0.2 +1.0 +0.4
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.3 +0.9 +0.4 +0.2 +0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.6 +0.1 +0.4 +0.8
in planta tomato xylem local (total stem) -0.7 +0.1 -0.1 +1.2 +1.4
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 +0.7 +0.1 +0.3 +0.8
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.8 -0.1 -0.2 +0.7 +0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +0.7 +0.3 +0.4 +0.9
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.1 +0.4 +0.3 +0.7 +0.7
in planta tomato xylem local (total stem) +0.5 +0.7 +0.1 +0.9 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.6 +0.1 +0.8 +0.9
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +2.4 -0.1 -0.2 +0.2 +0.4
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 +0.7 +0.3 +0.6 +0.7
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RALBFv3_RS23585
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RALBFv3_RS00590
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RALBFv3_RS00600
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RALBFv3_RS00605
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