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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS00400 and RALBFv3_RS00405 are separated by 14 nucleotides
RALBFv3_RS00405 and RALBFv3_RS00410 are separated by 105 nucleotides
RALBFv3_RS00410 and RALBFv3_RS00415 are separated by 104 nucleotides
RALBFv3_RS00415 and RALBFv3_RS00420 overlap by 1 nucleotides
RALBFv3_RS00400: RALBFv3_RS00400 - phosphatidate cytidylyltransferase, at 94,003 to 94,818
_RS00400
RALBFv3_RS00405: RALBFv3_RS00405 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase, at 94,833 to 96,014
_RS00405
RALBFv3_RS00410: RALBFv3_RS00410 - RIP metalloprotease RseP, at 96,120 to 97,508
_RS00410
RALBFv3_RS00415: RALBFv3_RS00415 - outer membrane protein assembly factor BamA, at 97,613 to 99,910
_RS00415
RALBFv3_RS00420: RALBFv3_RS00420 - outer membrane protein chaperone, at 99,910 to 100,464
_RS00420
Group
Condition
RALBFv3
_RS00400
RALBFv3
_RS00405
RALBFv3
_RS00410
RALBFv3
_RS00415
RALBFv3
_RS00420
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
N.D.
N.D.
-3.6
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
N.D.
N.D.
-3.1
N.D.
N.D.
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
N.D.
N.D.
-2.0
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
N.D.
N.D.
-1.6
N.D.
N.D.
in planta
Plant=Tomato_C42L PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
N.D.
-1.5
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
N.D.
N.D.
-1.1
N.D.
N.D.
in planta
Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
N.D.
-1.1
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet
N.D.
N.D.
-0.9
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
N.D.
N.D.
-0.9
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
N.D.
N.D.
+0.8
N.D.
N.D.
cpg no stress control
CPG no stress control
N.D.
N.D.
+0.8
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
N.D.
N.D.
+0.8
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet
N.D.
N.D.
+0.8
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
N.D.
+0.9
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol
N.D.
N.D.
+0.9
N.D.
N.D.
cpg no stress control
CPG no stress control
N.D.
N.D.
+1.0
N.D.
N.D.
smsa no antibiotic control
SMSA no antibiotic control
N.D.
N.D.
+1.0
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
N.D.
N.D.
+1.0
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix
N.D.
N.D.
+1.0
N.D.
N.D.
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
N.D.
N.D.
+1.1
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
N.D.
N.D.
+1.1
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix
N.D.
N.D.
+1.2
N.D.
N.D.
cpg no stress control
CPG no stress control
N.D.
N.D.
+1.2
N.D.
N.D.
smsa no antibiotic control
SMSA no antibiotic control
N.D.
N.D.
+1.2
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
N.D.
N.D.
+1.2
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
N.D.
N.D.
+1.3
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
N.D.
N.D.
+1.4
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix
N.D.
N.D.
+1.4
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
N.D.
N.D.
+1.6
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
N.D.
N.D.
+1.7
N.D.
N.D.
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