Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS00330 and RALBFv3_RS00335 are separated by 251 nucleotidesRALBFv3_RS00335 and RALBFv3_RS00340 overlap by 1 nucleotidesRALBFv3_RS00340 and RALBFv3_RS00345 are separated by 10 nucleotidesRALBFv3_RS00345 and RALBFv3_RS00350 overlap by 4 nucleotides RALBFv3_RS00330: RALBFv3_RS00330 - alpha/beta hydrolase, at 73,387 to 74,415 _RS00330 RALBFv3_RS00335: RALBFv3_RS00335 - chromosome segregation protein SMC, at 74,667 to 78,182 _RS00335 RALBFv3_RS00340: RALBFv3_RS00340 - cell division protein FtsZ, at 78,182 to 79,393 _RS00340 RALBFv3_RS00345: RALBFv3_RS00345 - NAD-dependent DNA ligase LigA, at 79,404 to 81,845 _RS00345 RALBFv3_RS00350: RALBFv3_RS00350 - peptide deformylase, at 81,842 to 82,375 _RS00350
Group Condition RALBFv3_RS00330 RALBFv3_RS00335 RALBFv3_RS00340 RALBFv3_RS00345 RALBFv3_RS00350
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 N.D. -4.9 N.D. -1.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.0 N.D. -4.7 N.D. -0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 N.D. -5.4 N.D. +0.9
cpg no stress control CPG no stress control -0.2 N.D. -3.8 N.D. -0.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.1 N.D. -4.5 N.D. +0.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.1 N.D. -4.6 N.D. +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.0 N.D. -4.0 N.D. -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.0 N.D. -3.9 N.D. -0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.0 N.D. -4.5 N.D. +0.4
smsa no antibiotic control SMSA no antibiotic control -0.1 N.D. -3.6 N.D. -0.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.0 N.D. -4.6 N.D. +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.1 N.D. -3.8 N.D. -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.1 N.D. -3.8 N.D. -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.1 N.D. -4.0 N.D. -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.2 N.D. -3.4 N.D. -0.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.1 N.D. -3.7 N.D. -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.1 N.D. -3.9 N.D. -0.1
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi -0.1 N.D. -4.1 N.D. +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.1 N.D. -3.9 N.D. +0.2
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi -0.0 N.D. -4.0 N.D. +0.3
stress SMSA with Ralstonia_antibiotic_mix +0.0 N.D. -3.8 N.D. +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 N.D. -4.3 N.D. +1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.3 N.D. -3.5 N.D. -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.1 N.D. -3.6 N.D. +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.0 N.D. -3.6 N.D. +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 N.D. -4.7 N.D. +1.7
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.1 N.D. -3.6 N.D. +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 N.D. -3.1 N.D. +0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 N.D. -3.3 N.D. +0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 N.D. -3.0 N.D. +1.8
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RALBFv3_RS00330
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RALBFv3_RS00335
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RALBFv3_RS00345
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RALBFv3_RS00350
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