Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS00205 and RALBFv3_RS00210 are separated by 79 nucleotidesRALBFv3_RS00210 and RALBFv3_RS00215 are separated by 93 nucleotidesRALBFv3_RS00215 and RALBFv3_RS23580 are separated by 68 nucleotidesRALBFv3_RS23580 and RALBFv3_RS00220 are separated by 138 nucleotides RALBFv3_RS00205: RALBFv3_RS00205 - alanine racemase, at 43,563 to 44,690 _RS00205 RALBFv3_RS00210: RALBFv3_RS00210 - DNA repair protein RadA, at 44,770 to 46,134 _RS00210 RALBFv3_RS00215: RALBFv3_RS00215 - disulfide bond formation protein B, at 46,228 to 46,707 _RS00215 RALBFv3_RS23580: RALBFv3_RS23580 - hypothetical protein, at 46,776 to 46,982 _RS23580 RALBFv3_RS00220: RALBFv3_RS00220 - CoA transferase, at 47,121 to 48,227 _RS00220
Group Condition RALBFv3_RS00205 RALBFv3_RS00210 RALBFv3_RS00215 RALBFv3_RS23580 RALBFv3_RS00220
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -1.8 -3.8 N.D. +0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -1.7 -3.8 N.D. +0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.7 -2.6 N.D. -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. -2.3 -0.9 N.D. -0.3
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi N.D. -0.1 -2.9 N.D. -0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -1.1 -2.2 N.D. +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -0.9 -1.5 N.D. -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.7 -1.8 N.D. -0.4
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. -1.1 -1.8 N.D. -0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -0.9 -2.0 N.D. +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. -0.7 -2.1 N.D. +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.4 -1.2 N.D. -0.1
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi N.D. -0.0 -2.9 N.D. +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -0.1 -2.1 N.D. -0.4
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. -0.8 -1.2 N.D. -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. -1.2 -1.6 N.D. +0.1
in planta tomato xylem local (total stem) N.D. -1.3 -1.3 N.D. +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. -1.3 -1.5 N.D. +0.3
cpg no stress control CPG no stress control N.D. -0.5 -2.0 N.D. +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.0 -1.6 N.D. +0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +0.2 -1.7 N.D. -0.9
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi N.D. +1.1 -3.0 N.D. -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. -0.7 -1.5 N.D. +0.4
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days N.D. -1.7 -0.4 N.D. +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. -0.6 -1.5 N.D. +0.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. -0.3 -1.7 N.D. +0.7
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days N.D. -1.9 +0.6 N.D. -0.1
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +1.0 -1.7 N.D. +0.4
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi N.D. +1.3 -1.4 N.D. +0.7
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.5 -0.8 N.D. +2.4
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