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Homologs
Fitness for 5 genes in
Ralstonia solanacearum IBSBF1503
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RALBFv3_RS00205 and RALBFv3_RS00210 are separated by 79 nucleotides
RALBFv3_RS00210 and RALBFv3_RS00215 are separated by 93 nucleotides
RALBFv3_RS00215 and RALBFv3_RS23580 are separated by 68 nucleotides
RALBFv3_RS23580 and RALBFv3_RS00220 are separated by 138 nucleotides
RALBFv3_RS00205: RALBFv3_RS00205 - alanine racemase, at 43,563 to 44,690
_RS00205
RALBFv3_RS00210: RALBFv3_RS00210 - DNA repair protein RadA, at 44,770 to 46,134
_RS00210
RALBFv3_RS00215: RALBFv3_RS00215 - disulfide bond formation protein B, at 46,228 to 46,707
_RS00215
RALBFv3_RS23580: RALBFv3_RS23580 - hypothetical protein, at 46,776 to 46,982
_RS23580
RALBFv3_RS00220: RALBFv3_RS00220 - CoA transferase, at 47,121 to 48,227
_RS00220
Group
Condition
RALBFv3
_RS00205
RALBFv3
_RS00210
RALBFv3
_RS00215
RALBFv3
_RS23580
RALBFv3
_RS00220
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
N.D.
-1.8
-3.8
N.D.
+0.6
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
N.D.
-1.7
-3.8
N.D.
+0.7
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-1.7
-2.6
N.D.
-0.2
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
N.D.
-2.3
-0.9
N.D.
-0.3
xylem sap
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi
N.D.
-0.1
-2.9
N.D.
-0.2
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
N.D.
-1.1
-2.2
N.D.
+0.2
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
N.D.
-0.9
-1.5
N.D.
-0.4
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-0.7
-1.8
N.D.
-0.4
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
N.D.
-1.1
-1.8
N.D.
-0.0
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
N.D.
-0.9
-2.0
N.D.
+0.1
stress
SMSA with Ralstonia_antibiotic_mix_minus_Penicillin
N.D.
-0.7
-2.1
N.D.
+0.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-1.4
-1.2
N.D.
-0.1
xylem sap
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi
N.D.
-0.0
-2.9
N.D.
+0.3
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
N.D.
-0.1
-2.1
N.D.
-0.4
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
N.D.
-0.8
-1.2
N.D.
-0.7
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
N.D.
-1.2
-1.6
N.D.
+0.1
in planta
tomato xylem local (total stem)
N.D.
-1.3
-1.3
N.D.
+0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol
N.D.
-1.3
-1.5
N.D.
+0.3
cpg no stress control
CPG no stress control
N.D.
-0.5
-2.0
N.D.
+0.2
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-1.0
-1.6
N.D.
+0.3
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days
N.D.
+0.2
-1.7
N.D.
-0.9
xylem sap
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi
N.D.
+1.1
-3.0
N.D.
-0.0
stress
SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin
N.D.
-0.7
-1.5
N.D.
+0.4
in planta
Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days
N.D.
-1.7
-0.4
N.D.
+0.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet
N.D.
-0.6
-1.5
N.D.
+0.5
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
N.D.
-0.3
-1.7
N.D.
+0.7
in planta
Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days
N.D.
-1.9
+0.6
N.D.
-0.1
in planta
Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
+1.0
-1.7
N.D.
+0.4
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi
N.D.
+1.3
-1.4
N.D.
+0.7
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
N.D.
-0.5
-0.8
N.D.
+2.4
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