Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS00170 and RALBFv3_RS00175 are separated by 105 nucleotidesRALBFv3_RS00175 and RALBFv3_RS00180 are separated by 84 nucleotidesRALBFv3_RS00180 and RALBFv3_RS00185 are separated by 152 nucleotidesRALBFv3_RS00185 and RALBFv3_RS00190 overlap by 4 nucleotides RALBFv3_RS00170: RALBFv3_RS00170 - malate synthase A, at 36,721 to 38,301 _RS00170 RALBFv3_RS00175: RALBFv3_RS00175 - DUF1857 domain-containing protein, at 38,407 to 38,877 _RS00175 RALBFv3_RS00180: RALBFv3_RS00180 - acyl-CoA-binding protein, at 38,962 to 39,231 _RS00180 RALBFv3_RS00185: RALBFv3_RS00185 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB, at 39,384 to 40,115 _RS00185 RALBFv3_RS00190: RALBFv3_RS00190 - ribosomal-protein-alanine N-acetyltransferase, at 40,112 to 40,639 _RS00190
Group Condition RALBFv3_RS00170 RALBFv3_RS00175 RALBFv3_RS00180 RALBFv3_RS00185 RALBFv3_RS00190
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 -3.2 +0.5 N.D. N.D.
in planta tomato xylem local (total stem) -0.3 -1.8 -0.4 N.D. N.D.
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.1 -1.1 -0.5 N.D. N.D.
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.1 -2.3 +0.6 N.D. N.D.
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.0 -0.8 -0.6 N.D. N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi +0.0 -0.7 -0.7 N.D. N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.0 -0.5 -0.8 N.D. N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -1.1 -0.1 N.D. N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.4 -0.2 -0.7 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.0 -1.0 -0.2 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.0 -1.4 +0.2 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.1 -1.1 -0.1 N.D. N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.4 +0.3 +0.1 N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.2 -0.8 +0.1 N.D. N.D.
in planta tomato xylem local (total stem) -0.4 +0.8 -0.6 N.D. N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1 dpi +0.2 +0.4 -0.6 N.D. N.D.
cpg no stress control CPG no stress control -0.1 +0.9 -0.6 N.D. N.D.
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.4 +0.6 -0.8 N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.5 +0.7 +0.6 N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.1 +0.8 +0.3 N.D. N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 +1.4 -0.5 N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.0 +2.0 +0.1 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 +1.3 +0.4 N.D. N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 +1.1 +0.6 N.D. N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.3 +1.9 N.D. N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 +1.5 +0.2 N.D. N.D.
in planta tomato xylem local (total stem) -0.2 +0.9 +0.9 N.D. N.D.
m63_quarter_strength M63_quarter_strength +0.1 +1.4 +0.3 N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.0 +1.4 +0.5 N.D. N.D.
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 +1.4 +1.4 N.D. N.D.
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RALBFv3_RS00170
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RALBFv3_RS00175
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RALBFv3_RS00185
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RALBFv3_RS00190
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