Fitness for 5 genes in Ralstonia solanacearum IBSBF1503

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500 ntRALBFv3_RS00105 and RALBFv3_RS00110 are separated by 195 nucleotidesRALBFv3_RS00110 and RALBFv3_RS00115 overlap by 44 nucleotidesRALBFv3_RS00115 and RALBFv3_RS00120 are separated by 3 nucleotidesRALBFv3_RS00120 and RALBFv3_RS00125 are separated by 84 nucleotides RALBFv3_RS00105: RALBFv3_RS00105 - type III effector protein, at 20,487 to 22,520 _RS00105 RALBFv3_RS00110: RALBFv3_RS00110 - hypothetical protein, at 22,716 to 23,060 _RS00110 RALBFv3_RS00115: RALBFv3_RS00115 - sensor histidine kinase, at 23,017 to 24,261 _RS00115 RALBFv3_RS00120: RALBFv3_RS00120 - DNA-binding response regulator, at 24,265 to 25,080 _RS00120 RALBFv3_RS00125: RALBFv3_RS00125 - acetolactate synthase isozyme II (large subunit) protein, at 25,165 to 26,892 _RS00125
Group Condition RALBFv3_RS00105 RALBFv3_RS00110 RALBFv3_RS00115 RALBFv3_RS00120 RALBFv3_RS00125
in planta Plant=Tomato cv. C42M; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.4 N.D. -0.3 -1.2 +0.4
in planta tomato xylem local (total stem) -0.2 N.D. -0.2 -1.4 +0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 N.D. -1.1 -0.9 +0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 N.D. -0.1 -1.2 -0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.1 N.D. -0.6 -0.5 +0.2
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.3 N.D. -0.6 -0.7 +0.6
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 N.D. -0.7 -1.0 +0.6
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days +0.3 N.D. +0.1 -1.3 +0.2
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.3 N.D. -0.6 -0.7 +0.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 N.D. -0.4 -1.0 +0.4
in planta Plant=Tomato_C42I; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 N.D. -0.9 -0.1 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 N.D. -0.4 -1.1 +0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 N.D. -0.8 -0.5 +0.6
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.1 N.D. +0.2 -0.8 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 N.D. -0.3 -0.6 +0.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.2 N.D. +0.1 -0.9 +0.2
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days -0.0 N.D. +0.3 -1.1 +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 N.D. -0.3 -0.4 +0.4
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.5 N.D. +0.4 -1.1 +0.9
in planta Plant=Tomato cv. Bonney Best; Treatment=None; Sample=xylem local; Collection=Direct; Time=3 dpi -0.0 N.D. -0.1 -0.7 +0.9
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 N.D. -0.5 +0.4 +0.4
in planta tomato xylem local (total stem) +0.2 N.D. -0.3 -0.3 +0.7
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 N.D. -0.0 -0.6 +0.6
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.2 N.D. +0.4 +0.5 -0.5
in planta Plant=banana; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=18days -0.0 N.D. +1.2 -1.0 +0.4
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 N.D. -0.1 +0.2 +0.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.3 N.D. -0.3 +0.5 +0.4
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.1 N.D. +0.8 -0.4 +0.6
in planta Plant=Impatiens cv. Orange Beacon; PreTreatment=None; PlantTreatment=None; Sample=Stem; Time=4days +0.4 N.D. +0.3 +0.1 +0.6
in planta tomato xylem local (total stem) +0.7 N.D. +0.4 +0.3 +1.0
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