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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_5111 and Psyr_5112 are separated by 98 nucleotides
Psyr_5112 and Psyr_5113 are separated by 811 nucleotides
Psyr_5113 and Psyr_5114 are separated by 11 nucleotides
Psyr_5114 and Psyr_5115 are separated by 281 nucleotides
Psyr_5111: Psyr_5111 - dTDP-glucose 4,6-dehydratase, at 6,063,045 to 6,063,770
_5111
Psyr_5112: Psyr_5112 - conserved hypothetical protein, at 6,063,869 to 6,064,690
_5112
Psyr_5113: Psyr_5113 - hypothetical protein, at 6,065,502 to 6,065,903
_5113
Psyr_5114: Psyr_5114 - hypothetical protein, at 6,065,915 to 6,067,318
_5114
Psyr_5115: Psyr_5115 - Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal, at 6,067,600 to 6,071,217
_5115
Group
Condition
Psyr
_5111
Psyr
_5112
Psyr
_5113
Psyr
_5114
Psyr
_5115
stress
KB with Fusaric 250 ug/ml
-0.1
-0.3
-0.2
-0.2
-0.0
kb
KB
-0.0
-0.2
-0.1
-0.3
-0.1
carbon source
Succinic Acid (C)
-0.2
+0.1
-0.5
-0.1
-0.0
stress
KB with Rotenone 0.125 mg/ml
-0.1
-0.0
-0.3
-0.1
-0.1
stress
KB with Novobiocin 250 ug/ml
-0.2
-0.1
-0.1
-0.1
-0.2
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.1
+0.0
-0.3
-0.2
-0.1
stress
KB with Rotenone 0.25 mg/ml
-0.2
+0.0
-0.2
-0.2
-0.1
stress
KB with Trimethoprim 125 ug/ml
+0.1
-0.2
-0.1
-0.2
-0.1
stress
KB with D-Salicin 240 ug/ml
-0.1
-0.2
-0.2
+0.1
-0.1
carbon source
Glycerol (C)
-0.0
+0.0
-0.3
-0.1
-0.1
stress
KB with Erythromycin 25 ug/ml
+0.1
-0.2
+0.0
-0.3
-0.1
stress
KB with Nitrofurantoin 125 ug/ml
+0.1
-0.0
-0.2
-0.3
-0.1
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
-0.1
+0.1
-0.1
-0.3
+0.0
stress
KB with Xanthyletin 10 mM
+0.0
-0.2
+0.1
-0.2
-0.2
stress
KB with Theaflavin 10 mM
+0.1
+0.1
-0.1
-0.3
-0.1
in planta
apoplastic, chopping recovery; Green bean
+0.1
+0.1
-0.3
-0.2
-0.0
stress
KB with Paclitaxel 10 mM
-0.1
-0.2
-0.1
+0.2
-0.1
carbon source
4-Aminobutyric (C)
-0.0
-0.0
-0.4
+0.2
-0.0
stress
KB with Totarol 10 mM
-0.1
-0.1
-0.1
+0.2
-0.1
carbon source
D-Gluconic (C)
-0.1
+0.2
-0.2
-0.0
-0.1
stress
KB with Mitomycin C 0.625 ug/ml
-0.1
+0.2
+0.5
-0.7
-0.2
in planta
apoplastic; Pepper
-0.1
+0.3
-0.1
-0.2
-0.0
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.1
+0.2
+0.2
-0.3
-0.0
carbon source
D-Mannose (C)
-0.0
+0.1
-0.3
+0.2
-0.1
in planta
apoplastic; Pepper
-0.2
+0.3
+0.1
-0.0
-0.1
in planta
apoplastic; Pepper
-0.2
+0.2
+0.2
+0.0
-0.1
in planta
Green bean; epiphytic
-0.1
+0.3
+0.1
-0.0
-0.1
stress
KB with Matrine 10 mM
+0.1
+0.2
+0.2
-0.1
-0.2
in planta
apoplastic, sonication recovery; Green bean
+0.2
+0.3
+0.2
+0.0
+0.0
in planta
apoplastic, sonication recovery; Green bean
+0.2
+0.2
+0.2
+0.1
+0.1
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