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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_5098 and Psyr_5099 are separated by 334 nucleotides
Psyr_5099 and Psyr_5100 overlap by 4 nucleotides
Psyr_5100 and Psyr_5101 are separated by 159 nucleotides
Psyr_5101 and Psyr_5102 are separated by 275 nucleotides
Psyr_5098: Psyr_5098 - conserved hypothetical protein, at 6,049,733 to 6,050,251
_5098
Psyr_5099: Psyr_5099 - conserved hypothetical protein, at 6,050,586 to 6,052,037
_5099
Psyr_5100: Psyr_5100 - conserved hypothetical protein, at 6,052,034 to 6,052,981
_5100
Psyr_5101: Psyr_5101 - Glyoxalase/bleomycin resistance protein/dioxygenase, at 6,053,141 to 6,053,554
_5101
Psyr_5102: Psyr_5102 - ABC transporter, at 6,053,830 to 6,054,609
_5102
Group
Condition
Psyr
_5098
Psyr
_5099
Psyr
_5100
Psyr
_5101
Psyr
_5102
stress
KB with Plumbagin 10 mM
-0.5
-0.3
-0.2
-0.1
-1.2
stress
KB with Avocatin A 10 mM
-0.4
-0.0
-0.3
-0.1
-1.3
stress
KB with Terpene 10 mM
-0.6
-0.0
-0.0
-0.6
-0.5
stress
KB with Physcion 10 mM
-0.5
-0.1
-0.2
-0.2
-0.8
kb
KB
-0.3
-0.2
+0.0
-0.3
-1.0
stress
KB with Isoliquiritigenin 10 mM
-0.3
-0.2
-0.3
-0.5
-0.4
stress
KB with Biochanin a diacetate 10 mM
-0.2
-0.2
-0.0
-0.2
-0.9
stress
KB with capsaicin 0.125 mg/ml
+0.2
-0.1
-0.2
-0.3
-1.2
stress
KB with dihydrojasmonic, methyl ester 10 mM
-0.3
-0.2
-0.2
-0.4
-0.4
in planta
apoplastic, grinding recovery; Green bean
+0.2
-0.1
-0.4
-0.0
-1.3
stress
KB with Totarol 10 mM
-0.4
-0.0
-0.1
-0.2
-0.7
in planta
apoplastic; Lima bean
-0.4
-0.1
-0.2
+0.0
-0.8
stress
KB with Conessine 10 mM
-0.2
-0.2
+0.0
-0.5
-0.6
in planta
apoplastic; Pepper
-0.1
+0.0
+0.3
-0.0
-1.4
stress
KB with L-alliin 10 mM
-0.5
-0.2
+0.1
-0.0
-0.6
in planta
epiphytic; Lima bean
-0.2
-0.2
+0.2
+0.1
-0.9
in planta
apoplastic; Pepper
+0.1
+0.2
-0.0
-0.3
-0.9
in planta
apoplastic; Lima bean
-0.5
+0.0
+0.3
+0.1
-0.6
in planta
apoplastic, sonication recovery; Green bean
-0.5
+0.2
-0.4
-0.4
+0.6
carbon source
Citric Acid (C)
-0.2
+0.0
+0.2
+0.4
-0.9
aphid
library passed through aphids in food, 72 hours
+0.3
-0.1
+0.3
+0.0
-0.9
aphid
library passed through aphids in food, 72 hours
+0.5
+0.3
+0.3
-1.5
+0.3
stress
KB with Nitrofurantoin 125 ug/ml
-0.5
-0.1
-0.1
+0.0
+1.0
stress
KB with Mitomycin C 0.625 ug/ml
+0.6
-0.1
+0.5
-0.1
-0.6
in planta
epiphytic; Green bean
+0.1
-0.1
-0.2
-0.0
+1.1
carbon source
Citric Acid (C)
+0.2
+0.0
-0.2
-0.2
+1.2
stress
KB with Acridine orange 62.5 ug/ml
+0.7
-0.1
+0.3
-0.1
+0.3
in planta
apoplastic; Green bean; 13 days
+0.4
+0.2
-0.2
-0.5
+1.3
carbon source
a-Ketoglutaric (C)
+0.6
-0.0
+0.1
+0.0
+0.8
in planta
apoplastic; Green bean; 6 days
+0.4
+0.0
+0.3
+0.3
+0.7
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