Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_5027 and Psyr_5028 are separated by 192 nucleotidesPsyr_5028 and Psyr_5029 are separated by 63 nucleotidesPsyr_5029 and Psyr_5030 are separated by 189 nucleotidesPsyr_5030 and Psyr_5031 overlap by 1 nucleotides Psyr_5027: Psyr_5027 - bacterial nucleoid protein HU alpha subunit, at 5,967,367 to 5,967,642 _5027 Psyr_5028: Psyr_5028 - FAD-dependent pyridine nucleotide-disulfide oxidoreductase, at 5,967,835 to 5,968,983 _5028 Psyr_5029: Psyr_5029 - Rubredoxin-type Fe(Cys)4 protein, at 5,969,047 to 5,969,214 _5029 Psyr_5030: Psyr_5030 - chorismate lyase, at 5,969,404 to 5,969,964 _5030 Psyr_5031: Psyr_5031 - 4-hydroxybenzoate octaprenyltransferase, at 5,969,964 to 5,970,854 _5031
Group Condition Psyr_5027 Psyr_5028 Psyr_5029 Psyr_5030 Psyr_5031
in planta apoplastic, sonication recovery; Green bean N.D. -0.1 -3.5 -0.2 N.D.
in planta apoplastic, sonication recovery; Green bean N.D. -0.3 -2.9 -0.0 N.D.
aphid library passed through aphids in food, 72 hours N.D. -0.2 -1.4 -0.7 N.D.
in planta apoplastic, grinding recovery; Green bean N.D. -0.5 -1.3 -0.5 N.D.
in planta epiphytic; Lima bean N.D. +0.2 -2.7 +0.6 N.D.
in planta apoplastic; Pepper N.D. -0.4 -0.7 -0.7 N.D.
in planta apoplastic; Lima bean N.D. -0.5 -1.5 +0.2 N.D.
stress KB with Plumbagin 10 mM N.D. -0.7 -0.7 -0.2 N.D.
stress KB with Peucenin 10 mM N.D. -0.2 -1.1 -0.3 N.D.
stress KB with Irigenin 10 mM N.D. -0.2 -0.9 -0.3 N.D.
in planta epiphytic; Lima bean N.D. +0.2 -2.0 +0.3 N.D.
stress KB with Emodin 10 mM N.D. +0.1 -1.0 -0.4 N.D.
stress KB with Quercetin 360 ug/ml N.D. -0.2 -1.0 +0.2 N.D.
aphid library passed through aphids in food, 72 hours N.D. -0.3 +0.1 -1.0 N.D.
mixed community Pseudomonas syringae pv. syringae B728a MLX with Paraburkholderia sabiae T6SS mutant N.D. -0.4 -0.8 +0.2 N.D.
in planta apoplastic; Green bean; 6 days N.D. -0.3 -0.9 +0.5 N.D.
stress DMSO N.D. -0.0 -1.0 +0.4 N.D.
stress KB with Chloramphenicol 12.5 ug/ml N.D. +0.2 -1.1 +0.3 N.D.
carbon source L-Malic (C) N.D. -0.1 +1.0 -0.9 N.D.
stress KB with Benzalkonium Chloride 6.25 ug/ml N.D. +0.1 -1.3 +1.3 N.D.
in planta Green bean; epiphytic N.D. +0.2 +0.8 -0.8 N.D.
stress KB with Berberine 250 ug/ml N.D. -0.1 +1.0 -0.2 N.D.
in planta apoplastic; Green bean; 6 days N.D. -0.2 +1.0 -0.2 N.D.
stress KB with Totarol 10 mM N.D. +0.1 +1.1 -0.3 N.D.
in planta apoplastic; Pepper N.D. -0.2 +0.8 +0.4 N.D.
stress KB with Acridine orange 62.5 ug/ml N.D. +0.5 -0.1 +1.0 N.D.
stress KB with Rotenone 0.25 mg/ml N.D. +0.2 +0.7 +0.6 N.D.
kb KB N.D. +0.2 +0.3 +0.9 N.D.
stress KB with Mitomycin C 0.625 ug/ml N.D. +0.2 +0.0 +1.2 N.D.
in planta apoplastic; Green bean; 13 days N.D. +0.8 +1.8 +0.0 N.D.
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