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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4943 and Psyr_4944 are separated by 149 nucleotides
Psyr_4944 and Psyr_4945 are separated by 103 nucleotides
Psyr_4945 and Psyr_4946 overlap by 4 nucleotides
Psyr_4946 and Psyr_4947 are separated by 209 nucleotides
Psyr_4943: Psyr_4943 - Peptidoglycan-binding LysM:Transport-associated, at 5,858,565 to 5,859,005
_4943
Psyr_4944: Psyr_4944 - transcriptional regulator, LysR family, at 5,859,155 to 5,860,036
_4944
Psyr_4945: Psyr_4945 - Formate dehydrogenase, subunit FdhD, at 5,860,140 to 5,860,976
_4945
Psyr_4946: Psyr_4946 - Oxidoreductase alpha (molybdopterin) subunit, at 5,860,973 to 5,863,309
_4946
Psyr_4947: Psyr_4947 - conserved hypothetical protein, at 5,863,519 to 5,863,959
_4947
Group
Condition
Psyr
_4943
Psyr
_4944
Psyr
_4945
Psyr
_4946
Psyr
_4947
stress
KB with Plumbagin 10 mM
-0.7
-0.4
-0.6
-0.3
+0.1
stress
KB with Nalidixic 12.5 ug/ml
-0.5
+0.0
-0.5
-0.5
-0.2
in planta
epiphytic; Green bean
-0.2
-0.6
-0.1
-0.6
-0.0
in planta
epiphytic; Lima bean
-0.1
+0.0
-0.6
-0.5
-0.3
in planta
Green bean; epiphytic
+0.2
-0.3
-0.8
-0.6
+0.1
in planta
apoplastic, grinding recovery; Green bean
-0.3
-0.2
-0.5
-0.6
+0.2
carbon source
a-Ketoglutaric (C)
-0.2
-0.1
-0.6
-0.3
-0.2
carbon source
4-hydroxybutyric (C)
+0.0
-0.5
-0.4
-0.4
+0.1
in planta
epiphytic; Lima bean
-0.0
+0.1
-0.6
-0.6
-0.1
stress
KB with Helenine 10 mM
-0.1
-0.7
-0.6
+0.2
+0.0
in planta
apoplastic, sonication recovery; Green bean
-0.8
-0.1
-0.1
+0.2
-0.3
stress
MBOA 2.5 mM
+0.1
-0.6
-0.3
-0.4
+0.1
in planta
epiphytic; Lima bean
-0.7
+0.2
+0.2
-0.2
-0.5
in planta
apoplastic, sonication recovery; Green bean
-0.8
+0.0
-0.1
+0.2
-0.4
in planta
epiphytic; Green bean
-0.2
-0.4
+0.3
-0.6
-0.1
carbon source
Sucrose (C)
+0.4
-0.5
-0.5
-0.3
-0.0
in planta
epiphytic; Lima bean
-0.2
-0.3
+0.4
-0.3
-0.2
in planta
apoplastic; Pepper
-0.4
-0.2
+0.7
-0.3
-0.4
in planta
apoplastic; Pepper
-0.7
-0.3
+0.0
+0.0
+0.4
aphid
library passed through aphids in food, 72 hours
-0.3
+0.0
-0.6
+0.3
+0.2
in planta
apoplastic; Pepper
-0.5
-0.2
-0.2
+0.1
+0.4
carbon source
Succinic Acid (C)
+0.2
-0.5
+0.2
-0.2
+0.2
in planta
apoplastic; Lima bean
+0.4
+0.5
-0.5
-0.0
-0.4
stress
KB with Mitomycin C 0.625 ug/ml
-0.9
-0.1
+0.1
-0.1
+1.1
in planta
apoplastic; Lima bean
+0.4
+0.3
-0.4
+0.1
-0.2
stress
KB with Acriflavine 7.75 ug/ml
-0.2
+0.1
+0.4
+0.2
-0.3
in planta
apoplastic; Green bean; 13 days
+1.0
+0.1
-1.2
+0.3
+0.3
stress
KB with Acridine orange 62.5 ug/ml
-0.7
+0.2
+0.2
+0.2
+0.8
in planta
apoplastic; Lima bean
+0.4
+0.5
+0.1
-0.4
+0.2
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-1.0
+0.0
+0.6
+0.3
+0.9
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