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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4842 and Psyr_4843 are separated by 21 nucleotides
Psyr_4843 and Psyr_4844 are separated by 142 nucleotides
Psyr_4844 and Psyr_4845 are separated by 13 nucleotides
Psyr_4845 and Psyr_4846 are separated by 531 nucleotides
Psyr_4842: Psyr_4842 - Phosphoenolpyruvate-protein phosphotransferase, at 5,747,721 to 5,750,000
_4842
Psyr_4843: Psyr_4843 - NUDIX hydrolase, at 5,750,022 to 5,750,501
_4843
Psyr_4844: Psyr_4844 - HAD-superfamily hydrolase, subfamily IB (PSPase-like):HAD-superfamily subfamily IB hydrolase, hypothetical 2, at 5,750,644 to 5,751,300
_4844
Psyr_4845: Psyr_4845 - conserved hypothetical protein, at 5,751,314 to 5,751,742
_4845
Psyr_4846: Psyr_4846 - L-threonine ammonia-lyase, at 5,752,274 to 5,753,788
_4846
Group
Condition
Psyr
_4842
Psyr
_4843
Psyr
_4844
Psyr
_4845
Psyr
_4846
carbon source
L-Malic (C)
-3.1
-2.2
-3.3
-0.1
+0.1
carbon source
4-hydroxybutyric (C)
-2.9
-2.3
-3.4
+0.4
-0.2
carbon source
Citric Acid (C)
-3.0
-2.1
-3.1
+0.2
-0.1
in planta
Green bean; epiphytic
-1.7
-1.3
-1.6
-0.7
-0.2
carbon source
L-Proline (C)
-0.5
-1.3
-3.2
+0.2
-0.2
in planta
Green bean; epiphytic
-1.7
-1.0
-1.7
-0.1
-0.2
aphid
library passed through aphids in food, 72 hours
-0.4
-1.3
-1.5
-1.4
-0.1
carbon source
Fumaric (C)
-0.2
-0.3
-4.0
+0.6
-0.3
carbon source
4-Aminobutyric (C)
-0.1
-0.2
-3.8
+0.1
-0.1
in planta
apoplastic; Lima bean
-1.6
-1.5
-0.1
-0.7
-0.2
in planta
apoplastic; Pepper
-1.6
+0.1
-1.7
-0.9
+0.1
aphid
library passed through aphids in food, 72 hours
-0.7
-0.9
-1.2
-0.7
-0.5
in planta
apoplastic; Lima bean
-1.7
-1.6
-0.2
-0.2
-0.2
in planta
epiphytic; Lima bean
-0.1
-0.7
-1.8
-1.4
+0.2
in planta
apoplastic; Pepper
-0.2
-1.1
-1.8
-0.6
-0.1
in planta
epiphytic; Lima bean
-0.5
-1.2
-1.6
-0.5
+0.2
in planta
apoplastic, chopping recovery; Green bean
-0.7
-2.0
-1.1
+0.1
+0.1
in planta
apoplastic; Pepper
-0.2
-1.2
-1.7
-0.4
+0.0
in planta
epiphytic; Green bean
-1.5
-1.4
-0.9
+0.1
+0.1
in planta
epiphytic; Green bean
-1.5
-1.4
-1.0
+0.5
-0.1
in planta
apoplastic; Green bean; 6 days
-1.5
-1.0
-1.0
-0.1
+0.2
stress
DMSO
-1.6
-1.3
+0.3
-0.9
+0.1
carbon source
Succinic Acid (C)
+0.0
-0.2
-3.3
+0.2
-0.0
in planta
apoplastic; Pepper
-1.1
+0.3
-1.7
-1.0
+0.2
no stress control
no stress control
-1.1
-1.8
+0.1
-0.4
+0.2
nophagecontrol
TIme6-nophage
+1.0
+0.4
-4.4
+0.2
-0.0
in planta
apoplastic; Green bean; 13 days
-1.3
-1.5
-0.9
+0.6
+0.4
carbon source
a-Ketoglutaric (C)
-0.6
-0.4
-2.6
+0.7
+0.2
nophagecontrol
TIme6-nophage
+1.0
+0.4
-3.8
-0.1
+0.0
stress
KB with Mitomycin C 0.625 ug/ml
+2.9
-0.0
+0.3
+0.5
-0.2
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