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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4805 and Psyr_4806 are separated by 151 nucleotides
Psyr_4806 and Psyr_4807 are separated by 242 nucleotides
Psyr_4807 and Psyr_4808 are separated by 445 nucleotides
Psyr_4808 and Psyr_4809 are separated by 202 nucleotides
Psyr_4805: Psyr_4805 - YD repeat protein, at 5,697,437 to 5,701,126
_4805
Psyr_4806: Psyr_4806 - hypothetical protein, at 5,701,278 to 5,701,649
_4806
Psyr_4807: Psyr_4807 - outer membrane porin, at 5,701,892 to 5,703,217
_4807
Psyr_4808: Psyr_4808 - conserved hypothetical protein, at 5,703,663 to 5,703,926
_4808
Psyr_4809: Psyr_4809 - conserved hypothetical protein, at 5,704,129 to 5,704,458
_4809
Group
Condition
Psyr
_4805
Psyr
_4806
Psyr
_4807
Psyr
_4808
Psyr
_4809
in planta
epiphytic; Green bean
-0.0
-0.0
+0.1
-2.6
-0.1
stress
KB with Fusaric 250 ug/ml
-0.0
-0.3
-0.0
-1.1
-0.8
carbon source
D-Mannose (C)
-0.0
-0.0
-0.0
-1.6
-0.5
stress
KB with Mitomycin C 0.625 ug/ml
-0.2
-1.2
-0.3
-0.5
+0.3
stress
KB with Isoliquiritigenin 10 mM
-0.0
-0.4
+0.1
-1.7
+0.1
stress
KB with Quercetin 360 ug/ml
-0.0
-0.3
-0.0
-1.7
+0.3
stress
KB with Rifampicin 0.1 mg/ml
-0.2
-0.6
-0.1
-0.8
-0.0
stress
KB with Piperic 10 mM
-0.1
+0.3
+0.2
-2.1
+0.1
stress
KB with Theaflavin 10 mM
-0.1
-0.8
+0.0
-1.0
+0.1
stress
DMSO
-0.1
+0.2
+0.1
-1.7
-0.2
no stress control
no stress control
-0.0
-0.1
-0.0
-1.0
-0.4
stress
KB with Asiaticoside 10 mM
-0.1
-0.2
-0.0
-1.1
-0.2
stress
KB with Rotenone 0.125 mg/ml
-0.1
-0.2
-0.1
-0.9
-0.3
stress
KB with Avocatin A 10 mM
-0.1
+0.2
+0.1
-1.7
+0.0
in planta
apoplastic, chopping recovery; Green bean
+0.0
+0.2
-0.1
-1.1
-0.3
stress
KB with Prenyletin 10 mM
-0.0
-0.1
-0.0
-1.3
+0.2
stress
DMSO
-0.1
+0.2
+0.1
-0.8
-0.6
stress
KB with Fusaric 250 ug/ml
-0.1
-0.2
+0.0
-1.1
+0.3
stress
MBOA 2.5 mM
-0.0
+0.3
-0.0
-0.9
-0.5
stress
KB with Emodin 10 mM
-0.0
+0.2
+0.2
-1.2
+0.2
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.1
-0.5
-0.0
+0.7
-0.4
in planta
epiphytic; Lima bean
-0.1
+0.1
+0.2
+0.9
-0.5
in planta
epiphytic; Lima bean
-0.0
-0.4
-0.1
+0.6
+0.6
in planta
apoplastic; Pepper
+0.2
-0.5
+0.1
+1.2
-0.3
in planta
apoplastic; Pepper
+0.1
-0.7
-0.0
+1.4
-0.0
stress
KB with Harmol 10 mM
-0.0
-0.0
+0.1
+1.4
-0.2
carbon source
a-Ketoglutaric (C)
+0.0
-0.1
-0.0
+1.6
+0.1
carbon source
L-Malic (C)
+0.0
-0.1
-0.1
+2.0
+0.2
in planta
apoplastic; Green bean; 13 days
+0.1
+0.9
+0.1
+1.3
+0.1
aphid
library passed through aphids in food, 72 hours
+0.0
+0.8
-0.1
+3.8
-0.0
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