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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4790 and Psyr_4791 are separated by 22 nucleotides
Psyr_4791 and Psyr_4792 are separated by 83 nucleotides
Psyr_4792 and Psyr_4793 are separated by 258 nucleotides
Psyr_4793 and Psyr_4794 are separated by 20 nucleotides
Psyr_4790: Psyr_4790 - phosphoglycerate kinase, at 5,677,155 to 5,678,318
_4790
Psyr_4791: Psyr_4791 - D-erythrose-4-phosphate dehydrogenase, at 5,678,341 to 5,679,384
_4791
Psyr_4792: Psyr_4792 - transketolase, at 5,679,468 to 5,681,465
_4792
Psyr_4793: Psyr_4793 - transcriptional regulator, ArsR family, at 5,681,724 to 5,682,719
_4793
Psyr_4794: Psyr_4794 - methionine adenosyltransferase, at 5,682,740 to 5,683,930
_4794
Group
Condition
Psyr
_4790
Psyr
_4791
Psyr
_4792
Psyr
_4793
Psyr
_4794
carbon source
Citric Acid (C)
N.D.
N.D.
N.D.
-0.7
N.D.
stress
KB with Gambogic Acid 10 mM
N.D.
N.D.
N.D.
-0.7
N.D.
stress
KB with Berberine 250 ug/ml
N.D.
N.D.
N.D.
-0.5
N.D.
carbon source
Glycerol (C)
N.D.
N.D.
N.D.
-0.5
N.D.
carbon source
a-Ketoglutaric (C)
N.D.
N.D.
N.D.
-0.4
N.D.
in planta
epiphytic; Lima bean
N.D.
N.D.
N.D.
-0.4
N.D.
mixed community
Pseudomonas syringae pv. syringae B728a MLX with Paraburkholderia sabiae T6SS mutant
N.D.
N.D.
N.D.
-0.4
N.D.
stress
KB with L-alliin 10 mM
N.D.
N.D.
N.D.
-0.4
N.D.
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
N.D.
N.D.
N.D.
-0.4
N.D.
stress
KB with dihydrojasmonic, methyl ester 10 mM
N.D.
N.D.
N.D.
-0.4
N.D.
stress
KB with Cantharidin 10 mM
N.D.
N.D.
N.D.
-0.4
N.D.
stress
KB with Avocadyne 10 mM
N.D.
N.D.
N.D.
-0.4
N.D.
in planta
epiphytic; Green bean
N.D.
N.D.
N.D.
-0.3
N.D.
stress
KB with Mitomycin C 0.625 ug/ml
N.D.
N.D.
N.D.
+0.3
N.D.
stress
KB with Palmatine chloride 10 mM
N.D.
N.D.
N.D.
+0.3
N.D.
no stress control
no stress control
N.D.
N.D.
N.D.
+0.4
N.D.
no stress control
no stress control
N.D.
N.D.
N.D.
+0.4
N.D.
in planta
apoplastic, chopping recovery; Green bean
N.D.
N.D.
N.D.
+0.4
N.D.
stress
KB with Quercetin 360 ug/ml
N.D.
N.D.
N.D.
+0.4
N.D.
stress
KB with Diallyl sulfide 10 mM
N.D.
N.D.
N.D.
+0.4
N.D.
stress
KB with Curcumin 10 mM
N.D.
N.D.
N.D.
+0.4
N.D.
stress
KB with Novobiocin 250 ug/ml
N.D.
N.D.
N.D.
+0.4
N.D.
stress
KB with Plumbagin 10 mM
N.D.
N.D.
N.D.
+0.4
N.D.
stress
KB with Methanol 5 vol%
N.D.
N.D.
N.D.
+0.5
N.D.
aphid
library passed through aphids in food, 72 hours
N.D.
N.D.
N.D.
+0.5
N.D.
stress
KB with Levodopa 10 mM
N.D.
N.D.
N.D.
+0.5
N.D.
in planta
apoplastic; Pepper
N.D.
N.D.
N.D.
+0.5
N.D.
in planta
epiphytic; Lima bean
N.D.
N.D.
N.D.
+0.6
N.D.
in planta
apoplastic, sonication recovery; Green bean
N.D.
N.D.
N.D.
+0.8
N.D.
in planta
apoplastic, sonication recovery; Green bean
N.D.
N.D.
N.D.
+0.9
N.D.
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