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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4781 and Psyr_4782 are separated by 106 nucleotides
Psyr_4782 and Psyr_4783 are separated by 15 nucleotides
Psyr_4783 and Psyr_4784 are separated by 84 nucleotides
Psyr_4784 and Psyr_4785 are separated by 228 nucleotides
Psyr_4781: Psyr_4781 - 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function DUF224, at 5,667,885 to 5,669,849
_4781
Psyr_4782: Psyr_4782 - NADH:flavin oxidoreductase/NADH oxidase, at 5,669,956 to 5,672,016
_4782
Psyr_4783: Psyr_4783 - conserved hypothetical protein, at 5,672,032 to 5,672,562
_4783
Psyr_4784: Psyr_4784 - Peptidase M19, renal dipeptidase, at 5,672,647 to 5,673,624
_4784
Psyr_4785: Psyr_4785 - Protein of unknown function DUF1311, at 5,673,853 to 5,674,263
_4785
Group
Condition
Psyr
_4781
Psyr
_4782
Psyr
_4783
Psyr
_4784
Psyr
_4785
in planta
apoplastic; Green bean; 13 days
-0.7
-1.3
-0.4
-0.6
-0.3
in planta
apoplastic; Lima bean
-0.6
-0.2
-0.2
-0.5
+0.0
in planta
Green bean; epiphytic
-0.4
-0.5
+0.1
-0.3
-0.2
in planta
apoplastic, grinding recovery; Green bean
-0.5
-0.1
+0.1
-0.6
-0.1
in planta
apoplastic; Lima bean
-0.5
-0.4
-0.0
-0.3
-0.0
in planta
epiphytic; Lima bean
-0.5
-0.2
-0.1
-0.3
+0.1
stress
KB with capsaicin 0.25 mg/ml
-0.4
+0.0
-0.2
-0.2
-0.2
in planta
apoplastic, chopping recovery; Green bean
-0.2
+0.1
+0.1
-0.4
-0.5
in planta
Green bean; epiphytic
-0.3
-0.4
+0.1
+0.1
-0.2
carbon source
4-hydroxybutyric (C)
-0.2
-0.3
+0.3
-0.1
-0.1
in planta
apoplastic; Green bean; 6 days
+0.2
-0.7
-0.1
-0.0
+0.1
in planta
apoplastic; Green bean; 6 days
+0.1
-0.6
+0.2
-0.2
-0.0
in planta
apoplastic; Pepper
-0.5
+0.1
-0.1
-0.1
+0.3
in planta
apoplastic; Pepper
-0.5
+0.1
-0.0
-0.2
+0.2
stress
DMSO
-0.6
+0.2
-0.0
+0.1
+0.1
stress
KB with Novobiocin 250 ug/ml
+0.4
-0.2
+0.0
-0.2
-0.2
in planta
apoplastic; Lima bean
-0.4
-0.0
-0.3
+0.4
+0.2
in planta
apoplastic; Pepper
-0.5
+0.3
+0.0
-0.1
+0.2
in planta
apoplastic, sonication recovery; Green bean
+0.1
-0.3
-0.2
+0.4
+0.1
in planta
apoplastic, grinding recovery; Green bean
-0.0
+0.2
-0.0
-0.4
+0.3
aphid
library passed through aphids in food, 72 hours
+0.2
-0.1
+0.6
-0.1
-0.4
in planta
apoplastic; Pepper
-0.2
+0.4
-0.1
-0.2
+0.2
mixed community
Pseudomonas syringae pv. syringae B728a MLX with Paraburkholderia sabiae T6SS mutant
+0.1
+0.2
-0.2
+0.4
-0.3
in planta
apoplastic; Lima bean
-0.0
-0.2
-0.3
+0.5
+0.2
aphid
library passed through aphids in food, 72 hours
+0.1
+0.4
-0.0
+0.2
-0.3
stress
KB with Mitomycin C 0.625 ug/ml
+0.6
+0.2
-0.3
-0.0
-0.2
stress
KB with Phloretin 250 ug/ml
+0.5
+0.2
-0.1
+0.1
-0.1
stress
KB with Conessine 10 mM
+0.2
-0.1
-0.2
+0.2
+0.5
stress
KB with Paclitaxel 10 mM
+0.3
+0.4
+0.1
-0.0
+0.2
stress
KB with Hydrastine (1R, 9S) 10 mM
+0.4
+0.3
+0.0
+0.1
+0.3
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