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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4755 and Psyr_4756 are separated by 7 nucleotides
Psyr_4756 and Psyr_4757 are separated by 54 nucleotides
Psyr_4757 and Psyr_4758 are separated by 368 nucleotides
Psyr_4758 and Psyr_4759 are separated by 98 nucleotides
Psyr_4755: Psyr_4755 - hydrolase, alpha/beta fold family, at 5,631,905 to 5,632,939
_4755
Psyr_4756: Psyr_4756 - 3-mercaptopyruvate sulfurtransferase, at 5,632,947 to 5,633,801
_4756
Psyr_4757: Psyr_4757 - transcriptional regulator, TetR family, at 5,633,856 to 5,634,518
_4757
Psyr_4758: Psyr_4758 - Phosphopantetheine adenylyltransferase, at 5,634,887 to 5,635,366
_4758
Psyr_4759: Psyr_4759 - 4Fe-4S ferredoxin, iron-sulfur binding protein, at 5,635,465 to 5,635,716
_4759
Group
Condition
Psyr
_4755
Psyr
_4756
Psyr
_4757
Psyr
_4758
Psyr
_4759
aphid
library passed through aphids in food, 72 hours
-0.1
-0.5
-0.9
N.D.
N.D.
aphid
library passed through aphids in food, 72 hours
-0.0
-0.4
-0.9
N.D.
N.D.
in planta
apoplastic; Green bean; 13 days
-0.5
-0.1
-0.1
N.D.
N.D.
aphid
library passed through aphids in food, 72 hours
-0.2
-0.4
-0.2
N.D.
N.D.
in planta
apoplastic; Lima bean
-0.3
-0.2
-0.3
N.D.
N.D.
in planta
apoplastic; Pepper
-0.5
-0.1
+0.0
N.D.
N.D.
in planta
apoplastic; Lima bean
-0.4
+0.1
-0.2
N.D.
N.D.
stress
KB with Fusaric 250 ug/ml
-0.3
+0.2
-0.3
N.D.
N.D.
in planta
epiphytic; Lima bean
+0.2
-0.3
-0.2
N.D.
N.D.
carbon source
Citric Acid (C)
+0.0
-0.5
+0.2
N.D.
N.D.
stress
KB with Avocatin A 10 mM
-0.1
-0.2
+0.2
N.D.
N.D.
stress
KB with Nonanoic 10 mM
-0.0
-0.3
+0.2
N.D.
N.D.
stress
KB with Curcumin 10 mM
-0.1
-0.3
+0.3
N.D.
N.D.
carbon source
Glycerol (C)
+0.0
+0.3
-0.3
N.D.
N.D.
carbon source
D-Mannose (C)
+0.1
+0.2
-0.3
N.D.
N.D.
stress
KB with Pterin-6-Carboxylic Acid 10 mM
-0.2
+0.3
-0.1
N.D.
N.D.
stress
KB with Mitomycin C 0.625 ug/ml
+0.2
+0.4
-0.5
N.D.
N.D.
mixed community
Pseudomonas syringae pv. syringae B728a MLX with Paraburkholderia sabiae T6SS mutant
-0.2
+0.3
+0.1
N.D.
N.D.
stress
KB with Quercetin 360 ug/ml
-0.2
+0.4
+0.0
N.D.
N.D.
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.0
+0.4
-0.1
N.D.
N.D.
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.1
+0.2
+0.2
N.D.
N.D.
stress
KB with Palmatine chloride 10 mM
+0.0
-0.1
+0.4
N.D.
N.D.
in planta
epiphytic; Lima bean
-0.2
+0.4
+0.1
N.D.
N.D.
stress
KB with D-Salicin 240 ug/ml
+0.0
+0.5
-0.1
N.D.
N.D.
in planta
apoplastic, chopping recovery; Green bean
+0.0
-0.1
+0.5
N.D.
N.D.
stress
KB with Acridine orange 62.5 ug/ml
+0.3
+0.3
-0.2
N.D.
N.D.
stress
KB with Totarol 10 mM
-0.0
+0.2
+0.3
N.D.
N.D.
stress
KB with Solanesol 10 mM
+0.0
+0.3
+0.3
N.D.
N.D.
in planta
epiphytic; Green bean
+0.2
+0.5
+0.1
N.D.
N.D.
in planta
apoplastic, grinding recovery; Green bean
+0.2
+0.6
-0.0
N.D.
N.D.
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