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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4722 and Psyr_4723 overlap by 21 nucleotides
Psyr_4723 and Psyr_4724 are separated by 50 nucleotides
Psyr_4724 and Psyr_4725 are separated by 163 nucleotides
Psyr_4725 and Psyr_4726 are separated by 190 nucleotides
Psyr_4722: Psyr_4722 - conserved hypothetical protein, at 5,600,980 to 5,601,543
_4722
Psyr_4723: Psyr_4723 - hypothetical protein, at 5,601,523 to 5,602,581
_4723
Psyr_4724: Psyr_4724 - Phospholipid/glycerol acyltransferase, at 5,602,632 to 5,603,555
_4724
Psyr_4725: Psyr_4725 - Protein of unknown function DUF785, at 5,603,719 to 5,604,222
_4725
Psyr_4726: Psyr_4726 - hypothetical protein, at 5,604,413 to 5,605,573
_4726
Group
Condition
Psyr
_4722
Psyr
_4723
Psyr
_4724
Psyr
_4725
Psyr
_4726
stress
KB with Chrysin 10 mM
-0.4
-0.4
-0.4
-0.1
N.D.
stress
KB with Plumbagin 10 mM
-0.2
-0.2
-0.3
-0.3
N.D.
in planta
apoplastic; Pepper
-0.1
+0.2
-0.6
-0.6
N.D.
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.4
-0.2
-0.5
+0.1
N.D.
in planta
apoplastic, grinding recovery; Green bean
-0.5
-0.6
+0.0
+0.1
N.D.
stress
KB with Dimethyl Sulfoxide 1 vol%
+0.1
-0.2
-0.6
-0.2
N.D.
stress
KB with Biochanin a diacetate 10 mM
-0.4
-0.2
-0.4
+0.2
N.D.
stress
KB with Avocatin B 10 mM
-0.2
-0.1
-0.6
+0.1
N.D.
stress
KB with Mitomycin C 0.625 ug/ml
-0.5
-0.5
+0.3
-0.1
N.D.
stress
KB with Isoliquiritigenin 10 mM
-0.2
-0.1
-0.5
+0.2
N.D.
in planta
apoplastic, grinding recovery; Green bean
-1.2
-0.1
+0.7
-0.0
N.D.
in planta
apoplastic; Green bean; 6 days
-0.6
-0.2
+0.1
+0.1
N.D.
in planta
epiphytic; Green bean
-0.7
-0.1
+0.1
+0.1
N.D.
stress
KB with Ginkgolide A 10 mM
-0.8
-0.1
+0.1
+0.2
N.D.
carbon source
Glycerol (C)
+0.3
-0.1
-0.5
-0.2
N.D.
in planta
apoplastic; Lima bean
-0.4
+0.4
-0.5
+0.1
N.D.
in planta
apoplastic; Pepper
-0.3
+0.3
-0.2
-0.2
N.D.
stress
KB with Paclitaxel 10 mM
-0.1
-0.2
-0.3
+0.4
N.D.
in planta
apoplastic; Green bean; 13 days
-0.2
-0.1
-0.2
+0.4
N.D.
in planta
Green bean; epiphytic
+0.4
+0.0
-0.4
-0.2
N.D.
in planta
epiphytic; Lima bean
-0.2
+0.0
+0.5
-0.4
N.D.
in planta
epiphytic; Green bean
+0.6
-0.0
-0.4
-0.1
N.D.
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.1
-0.2
+0.7
-0.0
N.D.
in planta
apoplastic; Pepper
-0.4
+0.1
+0.4
+0.3
N.D.
in planta
apoplastic; Lima bean
+0.1
+0.6
-0.4
+0.1
N.D.
stress
KB with Anisodamine Hydrobromide () 10 mM
+0.3
-0.2
+0.5
-0.1
N.D.
in planta
apoplastic; Pepper
+0.7
-0.3
-0.1
+0.3
N.D.
in planta
apoplastic, chopping recovery; Green bean
-0.3
+0.1
+0.8
+0.1
N.D.
in planta
apoplastic; Pepper
+0.8
-0.2
+0.0
+0.1
N.D.
stress
KB with capsaicin 0.125 mg/ml
+0.5
+0.1
+0.4
+0.1
N.D.
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