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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4719 and Psyr_4720 are separated by 319 nucleotides
Psyr_4720 and Psyr_4721 are separated by 120 nucleotides
Psyr_4721 and Psyr_4722 are separated by 224 nucleotides
Psyr_4722 and Psyr_4723 overlap by 21 nucleotides
Psyr_4719: Psyr_4719 - hypothetical protein, at 5,592,439 to 5,593,485
_4719
Psyr_4720: Psyr_4720 - conserved domain protein, at 5,593,805 to 5,594,821
_4720
Psyr_4721: Psyr_4721 - hypothetical protein, at 5,594,942 to 5,600,755
_4721
Psyr_4722: Psyr_4722 - conserved hypothetical protein, at 5,600,980 to 5,601,543
_4722
Psyr_4723: Psyr_4723 - hypothetical protein, at 5,601,523 to 5,602,581
_4723
Group
Condition
Psyr
_4719
Psyr
_4720
Psyr
_4721
Psyr
_4722
Psyr
_4723
stress
KB with Ginkgolide A 10 mM
-0.2
-0.2
-0.1
-0.8
-0.1
stress
KB with Chrysin 10 mM
-0.0
-0.3
+0.1
-0.4
-0.4
in planta
apoplastic, grinding recovery; Green bean
+0.0
+0.2
-0.1
-0.5
-0.6
stress
KB with L-alliin 10 mM
-0.3
+0.3
-0.0
-0.4
-0.4
stress
KB with Mitomycin C 0.625 ug/ml
+0.2
-0.2
+0.1
-0.5
-0.5
in planta
apoplastic, grinding recovery; Green bean
+0.1
+0.2
+0.1
-1.2
-0.1
aphid
library passed through aphids in food, 72 hours
-0.4
-0.4
+0.1
-0.2
+0.1
stress
KB with Aristolochic Acid 10 mM
+0.1
-0.4
+0.1
-0.3
-0.3
stress
KB with Helenine 10 mM
-0.2
+0.2
+0.0
-0.3
-0.3
stress
KB with Plumbagin 10 mM
-0.2
+0.2
-0.2
-0.2
-0.2
in planta
epiphytic; Green bean
-0.1
+0.1
+0.0
-0.6
+0.1
in planta
apoplastic, sonication recovery; Green bean
-0.5
+0.2
-0.1
+0.2
-0.2
in planta
epiphytic; Green bean
+0.0
+0.2
+0.0
-0.7
-0.1
stress
KB with capsaicin 0.25 mg/ml
-0.6
+0.1
-0.1
+0.1
+0.1
in planta
apoplastic; Pepper
+0.1
-0.3
+0.1
-0.4
+0.1
in planta
apoplastic; Pepper
+0.1
-0.3
+0.1
-0.3
+0.2
stress
KB with Palmatine chloride 10 mM
+0.2
+0.3
-0.0
-0.4
-0.1
in planta
apoplastic; Pepper
+0.1
-0.3
-0.0
+0.7
-0.3
in planta
epiphytic; Green bean
-0.3
+0.1
-0.1
+0.6
-0.1
in planta
apoplastic; Lima bean
+0.3
+0.0
-0.1
-0.4
+0.4
in planta
apoplastic, chopping recovery; Green bean
+0.4
+0.2
-0.0
-0.3
+0.1
stress
KB with Anisodamine Hydrobromide () 10 mM
+0.3
-0.1
+0.2
+0.3
-0.2
in planta
apoplastic; Lima bean
+0.2
-0.3
-0.0
+0.4
+0.2
in planta
apoplastic; Pepper
+0.4
+0.2
-0.1
-0.3
+0.3
in planta
apoplastic; Pepper
+0.3
-0.3
+0.1
+0.8
-0.2
carbon source
D-Mannose (C)
+0.2
+0.3
+0.1
-0.2
+0.3
in planta
apoplastic; Lima bean
+0.5
+0.1
-0.1
+0.4
-0.1
in planta
epiphytic; Green bean
+0.3
+0.1
+0.1
+0.6
-0.0
carbon source
Succinic Acid (C)
+0.1
+0.4
+0.1
+0.2
+0.2
in planta
apoplastic; Lima bean
+0.3
+0.3
+0.0
+0.1
+0.6
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