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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4633 and Psyr_4634 are separated by 97 nucleotides
Psyr_4634 and Psyr_4635 are separated by 98 nucleotides
Psyr_4635 and Psyr_4636 overlap by 10 nucleotides
Psyr_4636 and Psyr_4637 are separated by 65 nucleotides
Psyr_4633: Psyr_4633 - SpoVR, at 5,493,757 to 5,495,319
_4633
Psyr_4634: Psyr_4634 - Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein, at 5,495,417 to 5,496,643
_4634
Psyr_4635: Psyr_4635 - 7, 8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK, at 5,496,742 to 5,497,266
_4635
Psyr_4636: Psyr_4636 - Dihydroneopterin aldolase family:Dihydroneopterin aldolase, at 5,497,257 to 5,497,610
_4636
Psyr_4637: Psyr_4637 - acyl-phosphate glycerol-3-phosphate acyltransferase, at 5,497,676 to 5,498,254
_4637
Group
Condition
Psyr
_4633
Psyr
_4634
Psyr
_4635
Psyr
_4636
Psyr
_4637
stress
KB with Cantharidin 10 mM
+0.0
-2.6
N.D.
N.D.
-0.0
in planta
epiphytic; Lima bean
-0.3
-1.7
N.D.
N.D.
-0.3
in planta
Green bean; epiphytic
-0.3
-1.3
N.D.
N.D.
-0.5
stress
KB with Cimicifugoside H1 10 mM
-0.0
-1.9
N.D.
N.D.
+0.2
in planta
apoplastic; Pepper
-0.0
-1.3
N.D.
N.D.
-0.1
stress
KB with Flavone 0.125 mg/ml
+0.1
-1.4
N.D.
N.D.
-0.1
stress
KB with Karanjin 10 mM
+0.0
-1.3
N.D.
N.D.
-0.1
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
-0.0
-1.9
N.D.
N.D.
+0.5
stress
KB with Anabasine Hydrochloride 10 mM
+0.2
-1.4
N.D.
N.D.
+0.1
stress
KB with Erythromycin 25 ug/ml
+0.0
-1.3
N.D.
N.D.
+0.2
in planta
apoplastic; Pepper
-0.2
-1.0
N.D.
N.D.
+0.3
stress
KB with Acacetin 10 mM
+0.0
-1.3
N.D.
N.D.
+0.4
stress
KB with Usnic Acid 10 mM
+0.1
-1.2
N.D.
N.D.
+0.2
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
+0.1
-1.2
N.D.
N.D.
+0.2
in planta
apoplastic; Pepper
-0.1
-1.2
N.D.
N.D.
+0.5
carbon source
4-hydroxybutyric (C)
-0.1
-1.0
N.D.
N.D.
+0.4
carbon source
Citric Acid (C)
+0.2
+0.2
N.D.
N.D.
-1.1
stress
KB with Leucodin 10 mM
+0.1
-1.0
N.D.
N.D.
+0.4
stress
KB with Isosafrole 10 mM
+0.1
-0.9
N.D.
N.D.
+0.5
in planta
apoplastic; Pepper
+0.1
+0.9
N.D.
N.D.
-0.6
in planta
apoplastic; Lima bean
-0.3
+1.3
N.D.
N.D.
-0.5
in planta
apoplastic; Pepper
+0.1
+1.4
N.D.
N.D.
-0.4
in planta
epiphytic; Green bean
-0.2
+1.5
N.D.
N.D.
-0.2
stress
MBOA 1.2 mM
+0.0
+0.7
N.D.
N.D.
+0.8
in planta
epiphytic; Green bean
+0.0
+1.5
N.D.
N.D.
+0.1
stress
DMSO
-0.0
+0.8
N.D.
N.D.
+0.8
stress
MBOA 1.2 mM
+0.1
+0.8
N.D.
N.D.
+0.7
aphid
library passed through aphids in food, 72 hours
-0.1
+1.1
N.D.
N.D.
+0.7
no stress control
no stress control
+0.0
+0.9
N.D.
N.D.
+0.9
stress
DMSO
+0.1
+1.5
N.D.
N.D.
+0.4
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