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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4609 and Psyr_4610 are separated by 70 nucleotides
Psyr_4610 and Psyr_4611 overlap by 4 nucleotides
Psyr_4611 and Psyr_4612 are separated by 186 nucleotides
Psyr_4612 and Psyr_4613 are separated by 11 nucleotides
Psyr_4609: Psyr_4609 - anthranilate synthase, component I, at 5,466,494 to 5,467,975
_4609
Psyr_4610: Psyr_4610 - phosphoglycolate phosphatase, at 5,468,046 to 5,468,864
_4610
Psyr_4611: Psyr_4611 - ribulose-5-phosphate 3-epimerase, at 5,468,861 to 5,469,535
_4611
Psyr_4612: Psyr_4612 - Binding-protein-dependent transport systems inner membrane component, at 5,469,722 to 5,470,543
_4612
Psyr_4613: Psyr_4613 - Binding-protein-dependent transport systems inner membrane component, at 5,470,555 to 5,471,802
_4613
Group
Condition
Psyr
_4609
Psyr
_4610
Psyr
_4611
Psyr
_4612
Psyr
_4613
carbon source
L-Malic (C)
-4.2
-0.3
N.D.
-1.5
-1.6
in planta
apoplastic; Lima bean
-5.3
-0.5
N.D.
+0.2
-0.1
in planta
apoplastic; Lima bean
-5.4
-0.2
N.D.
+0.0
+0.1
in planta
apoplastic; Pepper
-3.9
-1.2
N.D.
-0.4
+0.0
in planta
epiphytic; Lima bean
-4.8
+0.1
N.D.
-0.5
-0.3
in planta
epiphytic; Lima bean
-4.9
-0.5
N.D.
+0.1
-0.1
in planta
epiphytic; Lima bean
-4.7
-0.5
N.D.
-0.2
-0.1
in planta
epiphytic; Lima bean
-4.8
-0.2
N.D.
-0.3
-0.0
in planta
apoplastic; Pepper
-3.9
-1.1
N.D.
-0.4
+0.0
in planta
apoplastic; Green bean; 13 days
-3.8
-1.2
N.D.
-0.1
-0.2
carbon source
Citric Acid (C)
-4.3
-0.5
N.D.
-0.2
-0.1
in planta
apoplastic; Green bean; 6 days
-4.2
-0.7
N.D.
-0.0
-0.2
carbon source
4-Aminobutyric (C)
-4.1
-0.2
N.D.
-0.6
-0.1
in planta
apoplastic, grinding recovery; Green bean
-4.9
-0.4
N.D.
+0.4
-0.1
in planta
apoplastic; Lima bean
-4.4
-0.6
N.D.
+0.1
-0.0
in planta
apoplastic; Pepper
-4.5
-0.5
N.D.
+0.2
+0.1
in planta
apoplastic; Green bean; 6 days
-4.0
-0.5
N.D.
-0.1
-0.1
carbon source
4-hydroxybutyric (C)
-4.0
-0.2
N.D.
-0.2
-0.2
in planta
epiphytic; Green bean
-4.1
-0.6
N.D.
-0.0
+0.2
in planta
apoplastic; Pepper
-4.7
-0.4
N.D.
+0.5
-0.0
carbon source
Glycerol (C)
-4.3
-0.1
N.D.
-0.2
-0.0
in planta
apoplastic, grinding recovery; Green bean
-4.8
+0.1
N.D.
+0.2
-0.0
carbon source
Succinic Acid (C)
-4.1
+0.1
N.D.
-0.5
+0.0
in planta
apoplastic; Lima bean
-4.4
-0.1
N.D.
+0.2
+0.0
in planta
apoplastic; Pepper
-4.3
-0.5
N.D.
+0.5
-0.0
in planta
apoplastic; Pepper
-4.2
-0.3
N.D.
+0.2
+0.1
in planta
apoplastic, chopping recovery; Green bean
-4.6
+0.1
N.D.
+0.2
+0.0
carbon source
Fumaric (C)
-4.2
+0.2
N.D.
+0.1
-0.0
in planta
apoplastic, sonication recovery; Green bean
-4.5
+0.2
N.D.
+0.2
+0.2
in planta
apoplastic, sonication recovery; Green bean
-4.6
+0.1
N.D.
+0.4
+0.3
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