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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4492 and Psyr_4493 are separated by 130 nucleotides
Psyr_4493 and Psyr_4494 are separated by 31 nucleotides
Psyr_4494 and Psyr_4495 are separated by 282 nucleotides
Psyr_4495 and Psyr_4496 are separated by 230 nucleotides
Psyr_4492: Psyr_4492 - hypothetical protein, at 5,353,708 to 5,353,956
_4492
Psyr_4493: Psyr_4493 - PAS:GGDEF, at 5,354,087 to 5,357,005
_4493
Psyr_4494: Psyr_4494 - ABC-type phosphate/phosphonate transport system periplasmic component-like protein, at 5,357,037 to 5,357,888
_4494
Psyr_4495: Psyr_4495 - Beta-lactamase, at 5,358,171 to 5,359,076
_4495
Psyr_4496: Psyr_4496 - outer membrane transport energization protein TonB, at 5,359,307 to 5,360,020
_4496
Group
Condition
Psyr
_4492
Psyr
_4493
Psyr
_4494
Psyr
_4495
Psyr
_4496
stress
KB with Mitomycin C 0.625 ug/ml
N.D.
-0.4
-0.1
-0.3
+0.3
aphid
library passed through aphids in food, 72 hours
N.D.
+0.4
-0.4
-0.3
+0.1
aphid
library passed through aphids in food, 72 hours
N.D.
+0.4
-0.4
+0.1
-0.2
aphid
library passed through aphids in food, 72 hours
N.D.
+0.4
-0.3
-0.1
+0.1
stress
KB with Acridine orange 62.5 ug/ml
N.D.
-0.2
+0.4
-0.3
+0.2
stress
KB with Prenyletin 10 mM
N.D.
-0.0
+0.4
+0.1
-0.4
in planta
epiphytic; Lima bean
N.D.
+0.2
+0.0
-0.4
+0.3
stress
KB with Veratrine 10 mM
N.D.
-0.1
+0.2
+0.2
-0.2
stress
KB with Chaulmoogric 10 mM
N.D.
-0.1
+0.4
+0.2
-0.1
stress
KB with Dimethyl Sulfoxide 1.25 vol%
N.D.
-0.1
+0.5
+0.1
-0.1
stress
KB with Rotenone 0.25 mg/ml
N.D.
+0.2
+0.0
+0.4
-0.1
stress
KB with Gossypetin 10 mM
N.D.
-0.1
+0.3
+0.2
+0.1
carbon source
L-Proline (C)
N.D.
+0.2
-0.0
-0.1
+0.5
carbon source
D-Mannose (C)
N.D.
+0.1
+0.2
-0.1
+0.4
stress
KB with dihydrojasmonic, methyl ester 10 mM
N.D.
-0.1
+0.3
+0.3
+0.1
stress
KB with Levodopa 10 mM
N.D.
-0.1
+0.4
+0.2
+0.1
stress
KB with Solanesol 10 mM
N.D.
-0.1
+0.3
+0.3
+0.1
stress
KB with Harmol 10 mM
N.D.
-0.1
+0.3
+0.6
-0.1
stress
KB with Hydrastine (1R, 9S) 10 mM
N.D.
-0.0
+0.4
+0.3
+0.0
stress
KB with Piperic 10 mM
N.D.
-0.1
+0.2
+0.4
+0.1
stress
KB with Palmatine chloride 10 mM
N.D.
-0.1
+1.0
-0.1
-0.1
stress
KB with L-alliin 10 mM
N.D.
-0.1
+0.7
+0.1
+0.1
stress
KB with Ginkgolide A 10 mM
N.D.
-0.1
+0.6
+0.3
-0.0
stress
KB with Isoliquiritigenin 10 mM
N.D.
-0.1
+0.5
+0.5
-0.0
stress
KB with Conessine 10 mM
N.D.
+0.0
+0.6
+0.3
-0.0
in planta
apoplastic; Lima bean
N.D.
+0.0
+0.3
+0.5
+0.1
in planta
apoplastic; Lima bean
N.D.
+0.0
+0.3
+0.5
+0.1
stress
KB with Nonanoic 10 mM
N.D.
-0.0
+0.5
+0.3
+0.3
in planta
apoplastic; Green bean; 13 days
N.D.
-0.1
+0.4
+0.4
+0.4
stress
KB with Terpene 10 mM
N.D.
-0.1
+0.7
+0.5
-0.0
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