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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4428 and Psyr_4429 overlap by 4 nucleotides
Psyr_4429 and Psyr_4430 are separated by 109 nucleotides
Psyr_4430 and Psyr_4431 are separated by 48 nucleotides
Psyr_4431 and Psyr_4432 are separated by 302 nucleotides
Psyr_4428: Psyr_4428 - amino acid/amide ABC transporter membrane protein 2, HAAT family, at 5,296,726 to 5,297,805
_4428
Psyr_4429: Psyr_4429 - ABC transporter, at 5,297,802 to 5,298,662
_4429
Psyr_4430: Psyr_4430 - amino acid/amide ABC transporter ATP-binding protein 2, HAAT family, at 5,298,772 to 5,299,470
_4430
Psyr_4431: Psyr_4431 - Urease accessory protein UreD, at 5,299,519 to 5,300,364
_4431
Psyr_4432: Psyr_4432 - Urease, gamma subunit, at 5,300,667 to 5,300,969
_4432
Group
Condition
Psyr
_4428
Psyr
_4429
Psyr
_4430
Psyr
_4431
Psyr
_4432
stress
KB with Isoliquiritigenin 10 mM
+0.0
-0.2
-0.3
-0.4
-0.4
stress
KB with L-alliin 10 mM
+0.2
-0.4
-0.2
-0.6
-0.2
in planta
epiphytic; Lima bean
-0.2
-0.2
-0.4
-0.2
-0.0
in planta
Green bean; epiphytic
-0.2
+0.1
-0.0
-0.3
-0.6
stress
KB with Prenyletin 10 mM
-0.0
-0.2
-0.1
-0.4
-0.2
in planta
apoplastic; Green bean; 6 days
-0.1
-0.8
-0.2
+0.2
-0.0
stress
KB with Ginkgolide A 10 mM
+0.0
-0.4
-0.1
-0.4
-0.1
stress
KB with 4-hydroxychalcone 10 mM
-0.0
+0.1
-0.4
-0.3
-0.2
in planta
epiphytic; Lima bean
-0.2
-0.4
-0.4
+0.2
-0.1
stress
KB with Levodopa 10 mM
+0.1
+0.0
-0.4
-0.4
-0.1
in planta
apoplastic; Pepper
-0.1
+0.3
-0.2
-0.5
-0.3
in planta
apoplastic, grinding recovery; Green bean
+0.2
-0.1
-0.1
-0.6
+0.0
in planta
apoplastic; Lima bean
+0.2
-0.4
+0.1
-0.3
-0.2
in planta
apoplastic, sonication recovery; Green bean
-0.1
+0.3
-0.8
-0.1
+0.2
in planta
apoplastic, sonication recovery; Green bean
-0.0
+0.2
-0.5
-0.2
+0.1
stress
KB with Veratrine 10 mM
+0.0
+0.2
-0.4
-0.4
+0.1
stress
KB with Ampicillin 15.6 ug/ml
-0.1
-0.2
+0.2
-0.4
+0.1
carbon source
D-Mannose (C)
-0.2
-0.0
+0.3
-0.6
+0.1
in planta
apoplastic; Pepper
+0.1
+0.2
-0.1
-0.4
-0.2
stress
KB with Terpene 10 mM
-0.1
-0.0
-0.2
+0.3
-0.4
stress
KB with dihydrojasmonic, methyl ester 10 mM
-0.1
+0.3
+0.1
-0.2
-0.3
stress
KB with Berberine 250 ug/ml
+0.2
-0.3
+0.2
-0.4
+0.1
stress
KB with Nalidixic 12.5 ug/ml
+0.2
-0.5
-0.1
+0.1
+0.2
in planta
epiphytic; Green bean
+0.1
+0.3
-0.1
-0.3
-0.2
in planta
apoplastic; Green bean; 13 days
-0.1
+0.6
-0.5
-0.4
+0.4
carbon source
L-Proline (C)
-0.1
-0.1
-0.1
+0.5
-0.2
stress
KB with Phloretin 250 ug/ml
+0.2
-0.3
+0.3
+0.2
-0.2
in planta
apoplastic; Pepper
+0.1
+0.3
+0.3
-0.3
+0.1
aphid
library passed through aphids in food, 72 hours
+0.2
-0.1
+0.6
+0.1
-0.3
in planta
epiphytic; Green bean
-0.3
+0.3
+0.4
+0.3
+0.1
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