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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4311 and Psyr_4312 are separated by 4 nucleotides
Psyr_4312 and Psyr_4313 are separated by 55 nucleotides
Psyr_4313 and Psyr_4314 are separated by 10 nucleotides
Psyr_4314 and Psyr_4315 are separated by 20 nucleotides
Psyr_4311: Psyr_4311 - Malonyl CoA-acyl carrier protein transacylase, at 5,137,115 to 5,140,282
_4311
Psyr_4312: Psyr_4312 - Erythronolide synthase, at 5,140,287 to 5,147,069
_4312
Psyr_4313: Psyr_4313 - Beta-ketoacyl synthase:Beta-ketoacyl synthase:Phosphopantetheine-binding protein, at 5,147,125 to 5,154,306
_4313
Psyr_4314: Psyr_4314 - Beta-ketoacyl synthase:Beta-ketoacyl synthase:Phosphopantetheine-binding protein, at 5,154,317 to 5,164,012
_4314
Psyr_4315: Psyr_4315 - Asparagine synthase, glutamine-hydrolyzing, at 5,164,033 to 5,166,009
_4315
Group
Condition
Psyr
_4311
Psyr
_4312
Psyr
_4313
Psyr
_4314
Psyr
_4315
stress
KB with Mitomycin C 0.625 ug/ml
-0.4
-0.3
-0.2
-0.3
-0.9
stress
KB with Nalidixic 12.5 ug/ml
-0.2
-0.2
-0.1
-0.1
-0.4
stress
KB with Isovanillin 10 mM
-0.1
-0.1
-0.1
-0.0
-0.6
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
-0.1
-0.1
-0.1
-0.1
-0.4
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.1
-0.2
-0.1
-0.1
-0.3
stress
KB with Aristolochic Acid 10 mM
-0.1
-0.2
-0.1
-0.1
-0.4
stress
KB with Anisodamine Hydrobromide () 10 mM
-0.1
-0.1
-0.1
-0.1
-0.4
stress
KB with Fusaric 250 ug/ml
-0.1
-0.1
-0.1
-0.2
-0.2
stress
KB with Fusaric 250 ug/ml
-0.1
-0.1
-0.1
-0.1
-0.4
stress
KB with Trimethoprim 125 ug/ml
+0.0
-0.2
-0.1
-0.2
-0.3
stress
KB with Theaflavin 10 mM
-0.2
-0.0
-0.1
-0.1
-0.3
stress
KB with Novobiocin 250 ug/ml
+0.0
-0.1
-0.1
-0.1
-0.3
stress
KB with Chrysin 10 mM
-0.1
-0.1
-0.0
-0.1
-0.2
stress
KB with Avocadyne 10 mM
-0.1
-0.1
-0.0
+0.0
-0.3
kb
KB
-0.0
-0.1
-0.1
-0.1
-0.3
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.0
-0.1
-0.1
-0.1
-0.2
stress
KB with Bergenin 10 mM
-0.1
-0.1
-0.0
-0.0
-0.3
stress
KB with Rotenone 0.125 mg/ml
-0.1
-0.1
-0.2
-0.1
-0.1
stress
KB with Karanjin 10 mM
-0.1
-0.0
-0.1
-0.1
-0.1
stress
KB with capsaicin 0.125 mg/ml
-0.1
-0.0
-0.1
-0.0
-0.1
stress
KB with Myricetin 10 mM
-0.1
-0.0
-0.0
-0.1
-0.2
stress
KB with Dimethyl Sulfoxide 1 vol%
-0.1
-0.0
-0.1
-0.1
-0.1
stress
KB with Nitrofurantoin 0.25 mg/ml
-0.1
-0.1
-0.1
-0.1
-0.1
kb
KB
-0.1
-0.1
-0.1
-0.1
-0.1
stress
KB with Methanol 5 vol%
+0.0
-0.1
-0.1
-0.2
-0.2
in planta
apoplastic; Green bean; 6 days
-0.1
-0.1
-0.1
-0.1
+0.1
in planta
apoplastic; Lima bean
+0.2
+0.0
+0.0
-0.1
-0.2
in planta
apoplastic; Green bean; 13 days
+0.2
-0.1
+0.0
-0.1
+0.1
in planta
apoplastic; Pepper
+0.0
+0.1
+0.1
+0.1
-0.2
in planta
apoplastic, sonication recovery; Green bean
+0.2
+0.0
+0.2
+0.1
+0.1
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