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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4176 and Psyr_4177 are separated by 175 nucleotides
Psyr_4177 and Psyr_4178 are separated by 160 nucleotides
Psyr_4178 and Psyr_4179 are separated by 3 nucleotides
Psyr_4179 and Psyr_4180 are separated by 159 nucleotides
Psyr_4176: Psyr_4176 - Polyribonucleotide nucleotidyltransferase, at 4,967,358 to 4,969,463
_4176
Psyr_4177: Psyr_4177 - SSU ribosomal protein S15P, at 4,969,639 to 4,969,908
_4177
Psyr_4178: Psyr_4178 - tRNA pseudouridine synthase B, at 4,970,069 to 4,970,986
_4178
Psyr_4179: Psyr_4179 - ribosome-binding factor A, at 4,970,990 to 4,971,406
_4179
Psyr_4180: Psyr_4180 - bacterial translation initiation factor 2 (bIF-2), at 4,971,566 to 4,974,091
_4180
Group
Condition
Psyr
_4176
Psyr
_4177
Psyr
_4178
Psyr
_4179
Psyr
_4180
carbon source
D-Mannose (C)
N.D.
N.D.
-2.0
N.D.
N.D.
stress
KB with Plumbagin 10 mM
N.D.
N.D.
-1.7
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
N.D.
N.D.
-1.5
N.D.
N.D.
stress
MBOA 1.2 mM
N.D.
N.D.
-1.3
N.D.
N.D.
stress
DMSO
N.D.
N.D.
-1.2
N.D.
N.D.
carbon source
Citric Acid (C)
N.D.
N.D.
-1.2
N.D.
N.D.
stress
KB with Fusaric 250 ug/ml
N.D.
N.D.
-1.1
N.D.
N.D.
stress
MBOA 0.5 mM
N.D.
N.D.
-1.0
N.D.
N.D.
stress
KB with Berberine 250 ug/ml
N.D.
N.D.
-0.9
N.D.
N.D.
in planta
apoplastic, sonication recovery; Green bean
N.D.
N.D.
-0.9
N.D.
N.D.
no stress control
no stress control
N.D.
N.D.
-0.9
N.D.
N.D.
stress
MBOA 0.5 mM
N.D.
N.D.
-0.9
N.D.
N.D.
stress
KB with Acriflavine 7.75 ug/ml
N.D.
N.D.
-0.9
N.D.
N.D.
stress
MBOA 1.2 mM
N.D.
N.D.
-0.9
N.D.
N.D.
stress
MBOA 1.2 mM
N.D.
N.D.
-0.8
N.D.
N.D.
stress
MBOA 2.5 mM
N.D.
N.D.
-0.8
N.D.
N.D.
stress
KB with Acridine orange 62.5 ug/ml
N.D.
N.D.
-0.8
N.D.
N.D.
carbon source
Citric Acid (C)
N.D.
N.D.
-0.8
N.D.
N.D.
carbon source
Succinic Acid (C)
N.D.
N.D.
-0.8
N.D.
N.D.
carbon source
Fumaric (C)
N.D.
N.D.
-0.8
N.D.
N.D.
stress
KB with Ginkgolide A 10 mM
N.D.
N.D.
-0.8
N.D.
N.D.
in planta
epiphytic; Lima bean
N.D.
N.D.
-0.7
N.D.
N.D.
stress
KB with Fusaric 250 ug/ml
N.D.
N.D.
-0.7
N.D.
N.D.
in planta
apoplastic, grinding recovery; Green bean
N.D.
N.D.
-0.7
N.D.
N.D.
aphid
library passed through aphids in food, 72 hours
N.D.
N.D.
-0.7
N.D.
N.D.
carbon source
4-hydroxybutyric (C)
N.D.
N.D.
-0.7
N.D.
N.D.
no stress control
no stress control
N.D.
N.D.
-0.7
N.D.
N.D.
in planta
apoplastic, grinding recovery; Green bean
N.D.
N.D.
-0.7
N.D.
N.D.
stress
KB with Nalidixic 12.5 ug/ml
N.D.
N.D.
+1.1
N.D.
N.D.
stress
KB with Avocatin B 10 mM
N.D.
N.D.
+2.5
N.D.
N.D.
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