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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_4050 and Psyr_4051 are separated by 164 nucleotides
Psyr_4051 and Psyr_4052 are separated by 28 nucleotides
Psyr_4052 and Psyr_4053 are separated by 21 nucleotides
Psyr_4053 and Psyr_4054 are separated by 73 nucleotides
Psyr_4050: Psyr_4050 - Protein of unknown function DUF479, at 4,833,333 to 4,833,932
_4050
Psyr_4051: Psyr_4051 - transcriptional regulator, ArsR family, at 4,834,097 to 4,834,411
_4051
Psyr_4052: Psyr_4052 - General substrate transporter:Major facilitator superfamily, at 4,834,440 to 4,835,606
_4052
Psyr_4053: Psyr_4053 - NADH:flavin oxidoreductase/NADH oxidase, at 4,835,628 to 4,836,677
_4053
Psyr_4054: Psyr_4054 - hypothetical protein, at 4,836,751 to 4,837,512
_4054
Group
Condition
Psyr
_4050
Psyr
_4051
Psyr
_4052
Psyr
_4053
Psyr
_4054
in planta
apoplastic; Green bean; 13 days
-0.5
-1.4
+0.2
-0.6
-0.8
carbon source
Citric Acid (C)
-0.4
-2.1
+0.2
-0.0
+0.1
stress
KB with Irigenin 10 mM
-1.4
-0.8
+0.2
+0.0
-0.0
in planta
apoplastic; Lima bean
-0.7
-1.3
-0.1
-0.2
+0.2
in planta
Green bean; epiphytic
-1.1
-0.9
+0.1
+0.3
-0.1
in planta
epiphytic; Lima bean
-2.1
+1.2
-0.1
+0.2
-0.8
stress
KB with Paeonol 10 mM
-0.2
-1.4
+0.1
+0.1
+0.2
stress
KB with Totarol 10 mM
-0.3
-1.1
+0.1
+0.2
+0.2
stress
DMSO
-0.3
-1.1
+0.2
+0.1
+0.2
carbon source
4-hydroxybutyric (C)
+0.2
-1.2
+0.3
-0.1
-0.1
stress
KB with Physcion 10 mM
+0.4
-1.1
-0.2
+0.0
+0.3
stress
KB with Lupeol 10 mM
+0.7
-1.0
+0.1
-0.0
-0.3
stress
KB with Mitomycin C 0.625 ug/ml
+0.2
-0.8
+0.5
+0.1
-0.4
stress
KB with Solanesol 10 mM
+0.7
-0.8
-0.1
+0.1
-0.1
in planta
apoplastic, sonication recovery; Green bean
-1.3
+1.7
+0.0
-0.0
-0.5
in planta
epiphytic; Green bean
+0.5
-0.9
+0.1
+0.4
-0.1
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
+0.4
-1.0
+0.1
+0.2
+0.2
in planta
apoplastic; Pepper
+0.9
-0.9
-0.0
-0.0
+0.3
aphid
library passed through aphids in food, 72 hours
-0.8
+1.3
-0.1
-0.0
+0.1
carbon source
D-Gluconic (C)
+0.8
-0.7
+0.3
+0.1
+0.0
in planta
apoplastic, grinding recovery; Green bean
+1.1
+0.2
+0.0
-0.3
-0.5
in planta
apoplastic, sonication recovery; Green bean
-0.9
+2.0
+0.3
-0.1
-0.6
aphid
library passed through aphids in food, 72 hours
+2.1
-0.6
-0.1
-0.1
-0.4
in planta
apoplastic; Lima bean
-0.5
+0.8
+0.1
+0.3
+0.2
in planta
apoplastic, grinding recovery; Green bean
+0.6
+1.8
-0.1
-0.1
-1.2
in planta
epiphytic; Green bean
+0.8
-0.4
+0.4
+0.3
+0.3
in planta
apoplastic; Pepper
+0.9
+0.9
-0.1
-0.1
-0.2
stress
KB with Plumbagin 10 mM
+0.9
-0.0
+1.2
+0.1
-0.0
in planta
apoplastic; Green bean; 6 days
+1.1
+1.1
-0.1
+0.1
-0.1
in planta
apoplastic; Pepper
+1.2
+1.0
+0.1
+0.0
+0.1
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