Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 193 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
Psyr_3999 and Psyr_4000 are separated by 170 nucleotides
Psyr_4000 and Psyr_4001 are separated by 167 nucleotides
Psyr_4001 and Psyr_4002 are separated by 145 nucleotides
Psyr_4002 and Psyr_4003 are separated by 0 nucleotides
Psyr_3999: Psyr_3999 - General substrate transporter:Major facilitator superfamily, at 4,763,337 to 4,764,662
_3999
Psyr_4000: Psyr_4000 - hypothetical protein, at 4,764,833 to 4,765,087
_4000
Psyr_4001: Psyr_4001 - conserved domain protein, at 4,765,255 to 4,765,572
_4001
Psyr_4002: Psyr_4002 - conserved hypothetical protein, at 4,765,718 to 4,766,341
_4002
Psyr_4003: Psyr_4003 - conserved hypothetical protein, at 4,766,342 to 4,766,581
_4003
Group
Condition
Psyr
_3999
Psyr
_4000
Psyr
_4001
Psyr
_4002
Psyr
_4003
carbon source
a-Ketoglutaric (C)
-3.0
-0.6
-0.5
-0.1
-0.1
stress
KB with Ginkgolide A 10 mM
+0.0
-0.1
-2.0
+0.0
+0.1
stress
KB with Isovanillin 10 mM
+0.0
-0.3
-0.7
-0.0
-0.7
stress
KB with Nalidixic 12.5 ug/ml
+0.1
-0.1
-0.9
-0.1
-0.4
stress
KB with Anisodamine Hydrobromide () 10 mM
+0.1
-0.1
-0.5
-0.2
-0.6
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
+0.2
-0.5
-0.5
+0.1
-0.6
stress
MBOA 1.2 mM
+0.1
+0.0
-0.8
-0.2
-0.3
stress
KB with Erythromycin 25 ug/ml
+0.0
-0.3
-1.0
-0.1
+0.1
stress
KB with Harmol 10 mM
-0.0
-0.3
-0.9
+0.2
-0.3
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.0
-0.9
-0.6
+1.0
-0.6
in planta
epiphytic; Lima bean
-0.4
-0.5
-0.2
+0.3
-0.4
in planta
apoplastic; Pepper
+0.0
-0.4
-0.5
-0.6
+0.5
stress
KB with Fusaric 250 ug/ml
-0.0
-0.3
-0.2
+0.3
-0.6
stress
KB with Rifampicin 0.1 mg/ml
-0.1
+0.3
-0.7
+0.1
-0.3
stress
KB with Harmalol 10 mM
-0.0
+0.1
-1.1
+0.2
+0.2
stress
KB with 4-hydroxychalcone 10 mM
+0.1
+0.1
-0.8
+0.2
-0.2
in planta
apoplastic; Lima bean
+0.2
+0.4
-1.1
+0.2
-0.3
stress
MBOA 1.2 mM
+0.1
-0.0
-0.9
+0.3
+0.1
stress
KB with Mitomycin C 0.625 ug/ml
-0.1
-0.8
+0.0
+0.8
-0.5
aphid
library passed through aphids in food, 72 hours
+0.2
+0.4
-0.7
-0.3
+0.1
in planta
apoplastic; Pepper
+0.1
+0.5
-1.0
+0.1
+0.1
stress
KB with Novobiocin 250 ug/ml
+0.4
-0.0
+0.0
+0.3
-0.7
stress
KB with Conessine 10 mM
+0.0
-0.0
-0.6
+0.3
+0.5
in planta
apoplastic, grinding recovery; Green bean
+0.1
+0.4
+0.4
-0.5
-0.1
in planta
epiphytic; Lima bean
+0.1
+0.6
-0.2
+0.2
-0.3
in planta
apoplastic, sonication recovery; Green bean
-0.4
+0.6
+1.2
-0.0
-0.9
in planta
apoplastic, sonication recovery; Green bean
-0.3
+0.6
+1.1
-0.3
-0.2
in planta
apoplastic, grinding recovery; Green bean
+0.3
+0.4
+1.3
-0.8
+0.3
aphid
library passed through aphids in food, 72 hours
-0.1
+0.2
+0.6
-0.2
+1.1
stress
KB with Acridine orange 62.5 ug/ml
+0.1
-0.1
+1.2
+1.0
-0.4
remove
Psyr_3999
plot
remove
Psyr_4000
plot
remove
Psyr_4001
remove
Psyr_4002
plot
remove
Psyr_4003
plot