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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3949 and Psyr_3950 are separated by 60 nucleotides
Psyr_3950 and Psyr_3951 overlap by 8 nucleotides
Psyr_3951 and Psyr_3952 overlap by 4 nucleotides
Psyr_3952 and Psyr_3953 are separated by 114 nucleotides
Psyr_3949: Psyr_3949 - DNA replication and repair protein RecO, at 4,697,047 to 4,697,730
_3949
Psyr_3950: Psyr_3950 - Small GTP-binding protein domain:GTP-binding:GTP-binding protein Era, at 4,697,791 to 4,698,693
_3950
Psyr_3951: Psyr_3951 - RNAse III, at 4,698,686 to 4,699,375
_3951
Psyr_3952: Psyr_3952 - conserved hypothetical protein, at 4,699,372 to 4,699,749
_3952
Psyr_3953: Psyr_3953 - signal peptidase I, Serine peptidase, MEROPS family S26A, at 4,699,864 to 4,700,718
_3953
Group
Condition
Psyr
_3949
Psyr
_3950
Psyr
_3951
Psyr
_3952
Psyr
_3953
stress
KB with Nitrofurantoin 0.25 mg/ml
-3.8
N.D.
N.D.
-0.5
N.D.
stress
KB with Nitrofurantoin 125 ug/ml
-2.5
N.D.
N.D.
-0.6
N.D.
carbon source
4-hydroxybutyric (C)
-0.6
N.D.
N.D.
-1.0
N.D.
stress
KB with Huperzine A 10 mM
-0.4
N.D.
N.D.
-1.1
N.D.
stress
KB with 2',2'-Bisepigallocatechin Digallate 10 mM
-0.7
N.D.
N.D.
-0.6
N.D.
stress
KB with Sinomenine 10 mM
-0.4
N.D.
N.D.
-0.9
N.D.
stress
KB with Methyl 6-Hydroxyangolensate 10 mM
-0.8
N.D.
N.D.
-0.5
N.D.
stress
KB with Novobiocin 250 ug/ml
-0.6
N.D.
N.D.
-0.6
N.D.
in planta
epiphytic; Green bean
-0.2
N.D.
N.D.
-1.0
N.D.
stress
KB with Chrysin 10 mM
-0.5
N.D.
N.D.
-0.7
N.D.
stress
KB with Quinine Hdrochloride 10 mM
-0.6
N.D.
N.D.
-0.6
N.D.
stress
KB with Methanol 5 vol%
-0.1
N.D.
N.D.
-1.1
N.D.
stress
KB with Peucenin 10 mM
-0.2
N.D.
N.D.
-1.0
N.D.
stress
KB with Xanthyletin 10 mM
-0.3
N.D.
N.D.
-0.8
N.D.
stress
KB with Khayasin C 10 mM
-0.2
N.D.
N.D.
-0.8
N.D.
in planta
Green bean; epiphytic
-0.6
N.D.
N.D.
-0.4
N.D.
stress
KB with Arecoline Hydrobromide 10 mM
-0.2
N.D.
N.D.
-0.8
N.D.
stress
KB with Karanjin 10 mM
-0.6
N.D.
N.D.
-0.4
N.D.
stress
KB with Estragole 10 mM
-0.3
N.D.
N.D.
-0.7
N.D.
in planta
apoplastic, grinding recovery; Green bean
+0.2
N.D.
N.D.
-1.2
N.D.
stress
KB with Gossypol-Acetic Acid Complex 10 mM
-0.4
N.D.
N.D.
-0.6
N.D.
in planta
apoplastic, grinding recovery; Green bean
+0.1
N.D.
N.D.
-0.9
N.D.
stress
KB with Conessine 10 mM
+0.3
N.D.
N.D.
-0.7
N.D.
stress
KB with Mitomycin C 0.625 ug/ml
-0.7
N.D.
N.D.
+0.8
N.D.
stress
MBOA 1.2 mM
-0.3
N.D.
N.D.
+0.8
N.D.
stress
MBOA 0.5 mM
-0.3
N.D.
N.D.
+0.8
N.D.
stress
DMSO
-0.2
N.D.
N.D.
+1.1
N.D.
carbon source
Citric Acid (C)
+0.1
N.D.
N.D.
+0.9
N.D.
stress
MBOA 0.5 mM
+0.2
N.D.
N.D.
+0.9
N.D.
no stress control
no stress control
+0.2
N.D.
N.D.
+1.1
N.D.
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