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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3841 and Psyr_3842 are separated by 233 nucleotides
Psyr_3842 and Psyr_3843 are separated by 535 nucleotides
Psyr_3843 and Psyr_3844 are separated by 150 nucleotides
Psyr_3844 and Psyr_3845 are separated by 325 nucleotides
Psyr_3841: Psyr_3841 - conserved hypothetical protein, at 4,576,691 to 4,577,032
_3841
Psyr_3842: Psyr_3842 - SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit, at 4,577,266 to 4,580,112
_3842
Psyr_3843: Psyr_3843 - diguanylate cyclase/phosphodiesterase, at 4,580,648 to 4,582,939
_3843
Psyr_3844: Psyr_3844 - conserved hypothetical protein, at 4,583,090 to 4,583,395
_3844
Psyr_3845: Psyr_3845 - L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein, at 4,583,721 to 4,584,845
_3845
Group
Condition
Psyr
_3841
Psyr
_3842
Psyr
_3843
Psyr
_3844
Psyr
_3845
in planta
apoplastic; Green bean; 6 days
-1.3
-1.2
-0.0
-0.9
-0.2
stress
KB with Plumbagin 10 mM
-1.4
-1.0
-0.1
-0.4
-0.2
in planta
apoplastic, grinding recovery; Green bean
-0.3
-1.1
-0.1
-1.9
+0.6
in planta
apoplastic; Pepper
-1.1
-0.4
-0.0
-1.0
-0.2
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.9
-0.9
-0.0
-0.5
-0.2
in planta
apoplastic; Pepper
-1.3
-0.4
+0.1
-0.9
-0.0
in planta
apoplastic; Green bean; 13 days
-0.1
-0.4
+0.1
-1.8
+0.2
stress
KB with Conessine 10 mM
-0.8
-1.1
+0.0
+0.1
-0.1
in planta
apoplastic, sonication recovery; Green bean
-0.2
-1.4
-0.6
+0.5
-0.1
stress
KB with Nonanoic 10 mM
-0.9
-0.8
-0.0
+0.1
-0.2
stress
KB with Palmatine chloride 10 mM
-0.9
-0.9
+0.0
-0.1
+0.1
stress
KB with Harmol 10 mM
-0.9
-0.8
-0.0
+0.3
-0.3
in planta
apoplastic, sonication recovery; Green bean
-0.1
-1.3
-0.8
+0.5
-0.1
stress
KB with Avocatin A 10 mM
-0.9
-1.2
+0.1
+0.4
-0.2
in planta
apoplastic; Green bean; 6 days
+0.1
-1.1
+0.1
-0.8
-0.1
in planta
epiphytic; Lima bean
-0.8
-0.7
-0.0
+0.5
-0.5
in planta
apoplastic, grinding recovery; Green bean
+0.3
-0.9
-0.3
-0.9
+0.2
in planta
apoplastic; Pepper
-1.4
+0.1
-0.2
-0.1
+0.2
stress
KB with Totarol 10 mM
-0.7
-0.8
-0.1
+0.4
-0.2
stress
KB with Carbenicillin 250 ug/ml
-0.6
-0.4
+0.2
-0.5
+0.3
carbon source
L-Malic (C)
-0.7
-0.7
-0.3
+0.7
+0.1
stress
KB with Fusaric 250 ug/ml
+0.5
-1.1
-0.3
+0.1
+0.1
carbon source
Succinic Acid (C)
-0.2
-0.6
+0.1
+0.6
-0.5
in planta
epiphytic; Lima bean
-0.7
-0.6
+0.1
+0.7
+0.1
aphid
library passed through aphids in food, 72 hours
-0.7
+0.0
+0.8
+0.4
-0.2
stress
KB with Sinomenine 10 mM
+0.4
-0.7
+0.1
+0.7
+0.0
carbon source
L-Proline (C)
+0.3
+0.1
+0.3
+0.7
-0.7
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+1.6
-0.5
+0.2
-0.6
+0.2
stress
KB with Mitomycin C 0.625 ug/ml
+2.4
-0.0
+0.2
-1.1
+0.2
stress
KB with Acridine orange 62.5 ug/ml
+1.7
-0.3
+0.1
+0.1
+0.4
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