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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3812 and Psyr_3813 are separated by 364 nucleotides
Psyr_3813 and Psyr_3814 are separated by 772 nucleotides
Psyr_3814 and Psyr_3815 are separated by 186 nucleotides
Psyr_3815 and Psyr_3816 are separated by 726 nucleotides
Psyr_3812: Psyr_3812 - CDS, at 4,532,855 to 4,533,283
_3812
Psyr_3813: Psyr_3813 - type III effector HopAF1, at 4,533,648 to 4,534,502
_3813
Psyr_3814: Psyr_3814 - Acetyltransferase, GNAT family, at 4,535,275 to 4,535,808
_3814
Psyr_3815: Psyr_3815 - hypothetical protein, at 4,535,995 to 4,538,115
_3815
Psyr_3816: Psyr_3816 - hypothetical protein, at 4,538,842 to 4,541,103
_3816
Group
Condition
Psyr
_3812
Psyr
_3813
Psyr
_3814
Psyr
_3815
Psyr
_3816
in planta
apoplastic; Pepper
-0.9
-0.4
-0.1
-0.0
+0.1
stress
KB with Veratrine 10 mM
-0.5
-0.1
-0.3
-0.2
+0.0
in planta
epiphytic; Green bean
-0.9
-0.0
-0.4
+0.1
+0.1
in planta
apoplastic; Pepper
-0.9
-0.2
-0.3
+0.1
+0.2
in planta
epiphytic; Green bean
-0.6
-0.2
-0.2
+0.2
-0.1
in planta
epiphytic; Green bean
-0.2
-0.2
-0.6
+0.2
+0.0
stress
KB with Lupeol 10 mM
+0.4
-0.3
-0.5
-0.0
-0.2
stress
KB with Carbenicillin 250 ug/ml
-0.5
-0.2
+0.4
-0.0
-0.2
stress
KB with Nalidixic 12.5 ug/ml
+0.2
-0.4
+0.4
-0.3
-0.4
in planta
epiphytic; Lima bean
-0.3
-0.4
+0.4
-0.1
+0.1
stress
KB with Trimethoprim 125 ug/ml
-0.2
-0.3
+0.5
-0.0
-0.2
carbon source
L-Malic (C)
+0.5
-0.3
-0.6
+0.1
+0.2
in planta
apoplastic; Pepper
+0.5
-0.1
-0.3
+0.0
+0.2
carbon source
Glycerol (C)
-0.5
+0.1
+0.6
-0.0
+0.1
stress
KB with Piperic 10 mM
+0.8
-0.2
-0.2
-0.0
+0.0
stress
KB with Mitomycin C 0.625 ug/ml
+1.0
+0.1
-0.5
+0.0
-0.1
stress
KB with Sclareolide 10 mM
+0.6
-0.3
+0.3
+0.0
-0.2
stress
KB with Terpene 10 mM
+0.4
-0.3
+0.5
-0.1
-0.1
stress
KB with Hydrastine (1R, 9S) 10 mM
+0.7
-0.3
+0.2
-0.0
-0.1
stress
KB with Erythromycin 25 ug/ml
+0.7
-0.2
+0.3
-0.0
-0.1
stress
KB with Nitrofurantoin 125 ug/ml
+0.4
-0.2
+0.6
-0.1
-0.1
in planta
apoplastic; Green bean; 13 days
-1.0
+0.0
+1.7
+0.2
-0.0
in planta
apoplastic, sonication recovery; Green bean
+0.9
+0.0
+0.4
-0.2
-0.2
stress
KB with Strychnine Sulfate 10 mM
+0.7
+0.1
+0.3
-0.1
+0.1
aphid
library passed through aphids in food, 72 hours
+0.6
+0.3
+0.3
-0.1
+0.0
in planta
apoplastic, grinding recovery; Green bean
+0.7
+0.1
+0.4
-0.1
-0.0
carbon source
Fumaric (C)
+0.6
+0.0
+0.4
+0.0
+0.1
carbon source
4-Aminobutyric (C)
+0.5
-0.0
+0.5
+0.1
+0.0
stress
KB with Fusaric 250 ug/ml
+0.5
+0.2
+0.5
+0.0
-0.0
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+1.3
+0.3
-0.3
-0.1
+0.0
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