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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3737 and Psyr_3738 are separated by 93 nucleotides
Psyr_3738 and Psyr_3739 are separated by 177 nucleotides
Psyr_3739 and Psyr_3740 are separated by 10 nucleotides
Psyr_3740 and Psyr_3741 are separated by 38 nucleotides
Psyr_3737: Psyr_3737 - transcriptional regulator, MarR family, at 4,451,490 to 4,451,924
_3737
Psyr_3738: Psyr_3738 - ATP-dependent DNA helicase RecQ, at 4,452,018 to 4,454,147
_3738
Psyr_3739: Psyr_3739 - conserved hypothetical protein, at 4,454,325 to 4,454,912
_3739
Psyr_3740: Psyr_3740 - Protein of unknown function DUF454, at 4,454,923 to 4,455,336
_3740
Psyr_3741: Psyr_3741 - Polyphosphate:AMP phosphotransferase, at 4,455,375 to 4,456,871
_3741
Group
Condition
Psyr
_3737
Psyr
_3738
Psyr
_3739
Psyr
_3740
Psyr
_3741
in planta
apoplastic; Green bean; 13 days
-0.5
-0.3
-0.9
-0.6
-0.0
in planta
apoplastic; Pepper
-0.3
+0.0
-2.5
+0.2
+0.3
in planta
apoplastic, grinding recovery; Green bean
-0.4
+0.0
-0.4
-0.4
-0.7
stress
KB with Nitrofurantoin 125 ug/ml
+0.2
-0.9
-0.7
-0.2
+0.3
stress
KB with Piperic 10 mM
-0.1
+0.0
-1.4
-0.0
+0.2
in planta
epiphytic; Lima bean
+0.3
-0.1
-2.0
+0.7
-0.2
stress
KB with Paeonol 10 mM
-0.2
-0.1
-0.9
-0.5
+0.5
in planta
apoplastic; Green bean; 6 days
-0.3
+0.4
-1.0
-0.1
-0.1
stress
KB with Strychnine Sulfate 10 mM
-0.3
-0.1
-1.0
-0.2
+0.5
in planta
epiphytic; Green bean
+0.3
-0.4
-1.1
-0.1
+0.4
in planta
apoplastic; Pepper
-0.4
+0.2
-1.1
+0.2
+0.3
stress
KB with Berberine 250 ug/ml
+0.5
-0.2
-0.9
-0.3
+0.1
stress
KB with dihydrojasmonic, methyl ester 10 mM
-0.2
+0.1
-1.0
-0.2
+0.6
stress
KB with Acriflavine 7.75 ug/ml
+0.4
-0.3
-1.1
+0.0
+0.4
in planta
apoplastic, chopping recovery; Green bean
-0.2
+0.2
+0.6
-0.4
-0.6
stress
KB with Mitomycin C 0.625 ug/ml
+0.4
-0.8
-0.5
-0.1
+1.0
stress
KB with Avocatin B 10 mM
+0.3
-0.1
-0.6
-0.1
+0.4
in planta
apoplastic, grinding recovery; Green bean
-0.4
-0.1
+0.9
-0.1
-0.3
in planta
apoplastic, sonication recovery; Green bean
-0.1
-0.4
-0.5
+1.0
-0.0
carbon source
Citric Acid (C)
+0.0
-0.2
+0.4
+0.5
-0.5
aphid
library passed through aphids in food, 72 hours
+0.4
+0.1
-0.9
+0.3
+0.3
in planta
apoplastic; Lima bean
+0.5
-0.0
+0.6
-0.2
-0.4
stress
MBOA 1.2 mM
-0.5
+0.2
+1.0
+0.0
-0.1
stress
MBOA 0.5 mM
-0.3
+0.1
+0.9
+0.2
+0.2
stress
MBOA 2.5 mM
-0.3
+0.0
+0.9
+0.2
+0.3
stress
KB with Nalidixic 12.5 ug/ml
+1.3
+0.4
+0.6
-1.1
+0.5
stress
KB with Acridine orange 62.5 ug/ml
+0.6
-0.1
+0.5
-0.1
+0.9
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.8
-0.2
+0.6
-0.1
+0.7
stress
KB with Novobiocin 250 ug/ml
+1.0
+0.0
+0.3
-0.2
+0.7
aphid
library passed through aphids in food, 72 hours
+0.7
+0.2
+1.3
-0.3
+0.9
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