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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3729 and Psyr_3730 are separated by 24 nucleotides
Psyr_3730 and Psyr_3731 are separated by 15 nucleotides
Psyr_3731 and Psyr_3732 are separated by 279 nucleotides
Psyr_3732 and Psyr_3733 are separated by 180 nucleotides
Psyr_3729: Psyr_3729 - hypothetical protein, at 4,437,553 to 4,437,909
_3729
Psyr_3730: Psyr_3730 - hypothetical protein, at 4,437,934 to 4,438,218
_3730
Psyr_3731: Psyr_3731 - conserved hypothetical protein, at 4,438,234 to 4,439,577
_3731
Psyr_3732: Psyr_3732 - hypothetical protein, at 4,439,857 to 4,440,036
_3732
Psyr_3733: Psyr_3733 - Outer membrane autotransporter barrel, at 4,440,217 to 4,443,333
_3733
Group
Condition
Psyr
_3729
Psyr
_3730
Psyr
_3731
Psyr
_3732
Psyr
_3733
stress
KB with Mitomycin C 0.625 ug/ml
-0.3
N.D.
-0.7
N.D.
-0.1
stress
KB with Avocadyne 10 mM
-0.5
N.D.
-0.3
N.D.
+0.0
carbon source
Sucrose (C)
-0.6
N.D.
-0.1
N.D.
-0.0
stress
KB with Dimethyl Sulfoxide 1 vol%
-0.7
N.D.
-0.1
N.D.
+0.1
stress
KB with Ginkgolide A 10 mM
-0.5
N.D.
-0.2
N.D.
+0.0
stress
KB with Cantharidin 10 mM
-0.6
N.D.
-0.1
N.D.
+0.0
in planta
epiphytic; Lima bean
-0.4
N.D.
-0.2
N.D.
-0.1
stress
KB with Methanol 5 vol%
-0.5
N.D.
-0.2
N.D.
+0.1
stress
KB with Nalidixic 12.5 ug/ml
-0.4
N.D.
-0.2
N.D.
+0.1
stress
KB with Aristolochic Acid 10 mM
-0.2
N.D.
-0.5
N.D.
+0.2
stress
KB with Emodin 10 mM
-0.5
N.D.
-0.1
N.D.
+0.1
aphid
library passed through aphids in food, 72 hours
-0.4
N.D.
-0.1
N.D.
+0.1
stress
KB with Erythromycin 25 ug/ml
-0.3
N.D.
-0.2
N.D.
+0.2
aphid
library passed through aphids in food, 72 hours
-0.3
N.D.
-0.1
N.D.
+0.2
stress
KB with capsaicin 0.125 mg/ml
-0.4
N.D.
+0.1
N.D.
+0.1
stress
KB with Chaulmoogric 10 mM
-0.3
N.D.
-0.2
N.D.
+0.2
in planta
epiphytic; Green bean
-0.4
N.D.
-0.1
N.D.
+0.2
stress
KB with Fusaric 250 ug/ml
-0.3
N.D.
-0.0
N.D.
+0.3
in planta
Green bean; epiphytic
-0.4
N.D.
+0.1
N.D.
+0.2
stress
KB with Anisodamine Hydrobromide () 10 mM
+0.0
N.D.
-0.3
N.D.
+0.3
aphid
library passed through aphids in food, 72 hours
-0.4
N.D.
+0.0
N.D.
+0.5
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.9
N.D.
-0.4
N.D.
-0.1
in planta
apoplastic, chopping recovery; Green bean
+0.3
N.D.
-0.1
N.D.
+0.2
stress
KB with Acridine orange 62.5 ug/ml
+1.1
N.D.
-0.3
N.D.
-0.3
stress
KB with Gambogic Acid 10 mM
+0.3
N.D.
-0.1
N.D.
+0.3
stress
KB with Avocatin A 10 mM
+0.2
N.D.
+0.1
N.D.
+0.4
in planta
apoplastic, grinding recovery; Green bean
+0.4
N.D.
+0.2
N.D.
+0.1
stress
KB with Huperzine A 10 mM
+0.4
N.D.
+0.1
N.D.
+0.2
in planta
apoplastic, sonication recovery; Green bean
+0.4
N.D.
-0.1
N.D.
+0.6
in planta
apoplastic, sonication recovery; Green bean
+0.6
N.D.
-0.1
N.D.
+0.5
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