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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3592 and Psyr_3593 are separated by 173 nucleotides
Psyr_3593 and Psyr_3594 are separated by 1004 nucleotides
Psyr_3594 and Psyr_3595 are separated by 10 nucleotides
Psyr_3595 and Psyr_3596 are separated by 93 nucleotides
Psyr_3592: Psyr_3592 - Nitroreductase, at 4,273,463 to 4,274,023
_3592
Psyr_3593: Psyr_3593 - K+ transporter Trk, at 4,274,197 to 4,275,651
_3593
Psyr_3594: Psyr_3594 - membrane protein-like protein, at 4,276,656 to 4,276,967
_3594
Psyr_3595: Psyr_3595 - Metallophosphoesterase, at 4,276,978 to 4,277,799
_3595
Psyr_3596: Psyr_3596 - Selenoprotein W-related protein, at 4,277,893 to 4,278,195
_3596
Group
Condition
Psyr
_3592
Psyr
_3593
Psyr
_3594
Psyr
_3595
Psyr
_3596
aphid
library passed through aphids in food, 72 hours
+0.0
+0.1
+0.1
-0.1
-2.5
in planta
apoplastic; Green bean; 13 days
+0.0
+0.1
-0.9
+0.1
-0.8
stress
KB with Prenyletin 10 mM
-0.4
+0.0
+0.0
-0.2
-0.8
stress
KB with Curcumin 10 mM
-0.3
+0.0
-0.3
-0.3
-0.5
in planta
epiphytic; Lima bean
-0.7
-0.0
-1.0
+0.6
-0.2
aphid
library passed through aphids in food, 72 hours
+0.3
-0.1
-0.9
+0.1
-0.5
carbon source
Citric Acid (C)
-0.3
-0.4
+0.4
-0.3
+0.2
in planta
epiphytic; Green bean
+0.2
+0.3
-1.1
-0.2
+0.6
stress
MBOA 2.5 mM
+0.4
-0.7
-0.2
-0.1
+0.4
stress
KB with Rotenone 0.125 mg/ml
-0.4
-0.1
+0.7
+0.1
-0.5
stress
KB with Dimethyl Sulfoxide 1 vol%
+0.7
-0.1
-0.7
-0.0
+0.0
in planta
epiphytic; Green bean
+0.0
+0.2
-0.9
-0.4
+1.1
aphid
library passed through aphids in food, 72 hours
-0.4
+0.2
-0.4
+0.2
+0.6
stress
KB with capsaicin 0.25 mg/ml
-0.4
-0.2
+0.7
+0.1
+0.0
stress
KB with Harmalol 10 mM
+0.3
-0.4
+0.6
+0.2
-0.5
carbon source
L-Malic (C)
+0.4
+0.1
+0.6
-0.3
-0.2
carbon source
Citric Acid (C)
+0.3
+0.0
+0.8
-0.2
-0.3
carbon source
a-Ketoglutaric (C)
+0.4
-0.1
+0.6
-0.3
-0.0
in planta
apoplastic, grinding recovery; Green bean
+0.9
+0.2
+0.0
+0.2
-0.6
in planta
apoplastic; Lima bean
-0.3
+0.2
+0.5
-0.0
+0.5
in planta
apoplastic; Pepper
-0.3
+0.1
+1.1
+0.4
-0.2
stress
KB with Mitomycin C 0.625 ug/ml
+0.0
+0.1
-0.9
+0.5
+1.4
in planta
apoplastic, sonication recovery; Green bean
+1.2
-0.1
-0.0
+0.5
-0.4
in planta
Green bean; epiphytic
-0.2
+0.2
+0.3
+0.1
+0.9
in planta
apoplastic, grinding recovery; Green bean
+0.1
+0.1
+0.7
+0.6
-0.2
in planta
apoplastic, chopping recovery; Green bean
+0.8
-0.0
-0.2
+0.6
+0.2
in planta
apoplastic, sonication recovery; Green bean
+1.4
+0.1
-0.1
+0.5
-0.4
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.0
+0.2
+0.1
+0.7
+0.8
stress
KB with Acridine orange 62.5 ug/ml
-0.1
+0.3
+0.2
+0.8
+0.7
in planta
Green bean; epiphytic
-0.0
+0.2
+0.2
+0.5
+1.1
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