Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 193 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
Psyr_3543 and Psyr_3544 are separated by 16 nucleotides
Psyr_3544 and Psyr_3545 are separated by 101 nucleotides
Psyr_3545 and Psyr_3546 are separated by 138 nucleotides
Psyr_3546 and Psyr_3547 are separated by 21 nucleotides
Psyr_3543: Psyr_3543 - transcriptional regulator, AraC family, at 4,220,788 to 4,221,675
_3543
Psyr_3544: Psyr_3544 - putative integral membrane protein, at 4,221,692 to 4,222,666
_3544
Psyr_3545: Psyr_3545 - Short-chain dehydrogenase/reductase SDR, at 4,222,768 to 4,223,511
_3545
Psyr_3546: Psyr_3546 - transcriptional regulator, AraC family, at 4,223,650 to 4,224,558
_3546
Psyr_3547: Psyr_3547 - transcriptional regulator, TetR family, at 4,224,580 to 4,225,143
_3547
Group
Condition
Psyr
_3543
Psyr
_3544
Psyr
_3545
Psyr
_3546
Psyr
_3547
in planta
apoplastic; Pepper
-0.8
-0.3
-1.7
-0.2
+0.1
in planta
apoplastic; Pepper
-0.7
-0.1
-1.4
-0.2
-0.0
stress
KB with Carbenicillin 250 ug/ml
-0.1
-0.1
-0.6
-0.3
-1.4
in planta
apoplastic; Green bean; 6 days
-0.6
-0.2
-0.2
-0.1
-0.6
in planta
apoplastic; Green bean; 6 days
-0.3
-0.1
-0.5
+0.1
-0.7
in planta
apoplastic, chopping recovery; Green bean
-0.3
+0.2
-0.7
-0.1
-0.4
carbon source
Glycerol (C)
-0.0
-0.2
-0.9
+0.1
-0.3
in planta
apoplastic; Lima bean
-0.3
-0.3
+0.1
-0.5
-0.3
stress
KB with Nalidixic 12.5 ug/ml
-0.1
+0.1
-0.6
+0.1
-0.7
carbon source
4-Aminobutyric (C)
+0.1
-0.1
-0.5
+0.3
-0.9
carbon source
Citric Acid (C)
-0.3
-0.5
-0.2
+0.3
-0.4
stress
KB with Biochanin a diacetate 10 mM
+0.3
-0.0
-0.6
+0.1
-0.7
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.1
+0.6
-1.1
+0.3
-0.5
in planta
apoplastic, grinding recovery; Green bean
+1.0
-0.0
-2.2
+0.2
+0.2
stress
KB with Aristolochic Acid 10 mM
+0.0
-0.1
+0.6
+0.2
-1.1
stress
KB with Mitomycin C 0.625 ug/ml
+0.0
+0.7
-0.3
-0.4
-0.3
stress
KB with Acridine orange 62.5 ug/ml
+0.2
+0.4
-0.5
+0.2
-0.5
stress
KB with Esculin Monohydrate 10 mM
+0.2
+0.1
+0.4
-0.0
-0.9
in planta
apoplastic, grinding recovery; Green bean
+0.6
+0.4
-0.3
-0.3
-0.5
stress
MBOA 1.2 mM
+0.3
+0.0
-0.7
+0.4
-0.2
stress
MBOA 2.5 mM
+0.3
+0.2
-0.6
+0.3
-0.3
aphid
library passed through aphids in food, 72 hours
+0.3
+0.5
-0.6
+0.1
-0.4
in planta
epiphytic; Lima bean
-0.0
+0.2
+0.7
-0.4
-0.5
stress
KB with Rotenone 0.25 mg/ml
+0.1
+0.1
+0.7
-0.4
-0.5
stress
KB with Brucine 10 mM
+0.2
+0.0
+0.5
+0.1
-0.7
stress
KB with Gambogic Acid 10 mM
-0.0
+0.2
+0.9
-0.2
-0.7
stress
KB with capsaicin 0.25 mg/ml
+0.1
+0.1
+0.8
-0.3
-0.4
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
+0.0
+0.0
+0.8
+0.4
-0.7
aphid
library passed through aphids in food, 72 hours
+0.4
+0.4
-0.0
-1.0
+0.7
stress
KB with capsaicin 0.125 mg/ml
+0.4
+0.3
+0.5
-0.1
-0.5
remove
Psyr_3543
plot
remove
Psyr_3544
plot
remove
Psyr_3545
remove
Psyr_3546
plot
remove
Psyr_3547
plot