Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 193 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
Psyr_3534 and Psyr_3535 are separated by 117 nucleotides
Psyr_3535 and Psyr_3536 overlap by 31 nucleotides
Psyr_3536 and Psyr_3537 are separated by 217 nucleotides
Psyr_3537 and Psyr_3538 are separated by 117 nucleotides
Psyr_3534: Psyr_3534 - Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer, at 4,211,791 to 4,213,680
_3534
Psyr_3535: Psyr_3535 - conserved hypothetical protein, at 4,213,798 to 4,214,592
_3535
Psyr_3536: Psyr_3536 - hypothetical protein, at 4,214,562 to 4,214,981
_3536
Psyr_3537: Psyr_3537 - hydrolase, at 4,215,199 to 4,216,062
_3537
Psyr_3538: Psyr_3538 - transcriptional regulator, TetR family, at 4,216,180 to 4,216,782
_3538
Group
Condition
Psyr
_3534
Psyr
_3535
Psyr
_3536
Psyr
_3537
Psyr
_3538
stress
KB with Mitomycin C 0.625 ug/ml
-0.3
-0.2
-0.4
+0.1
-0.5
in planta
apoplastic, grinding recovery; Green bean
-0.4
-0.2
-0.6
-0.3
+0.1
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.1
-0.2
-0.5
+0.2
-0.5
stress
KB with Quercetin 360 ug/ml
-0.3
-0.0
-0.3
-0.1
-0.4
in planta
apoplastic; Pepper
-0.3
-0.3
-0.2
-0.0
-0.1
stress
KB with Acridine orange 62.5 ug/ml
-0.3
-0.1
-0.2
+0.1
-0.6
stress
KB with Ferulic Acid 180 ug/ml
-0.3
-0.0
-0.4
-0.1
-0.1
in planta
apoplastic; Pepper
+0.1
-0.0
-1.0
-0.1
+0.3
stress
KB with Fusaric 250 ug/ml
-0.3
+0.0
-0.4
+0.3
-0.3
stress
KB with Chloramphenicol 12.5 ug/ml
-0.3
+0.1
-0.2
-0.2
+0.1
in planta
apoplastic; Pepper
+0.2
-0.3
-0.6
+0.1
+0.3
in planta
apoplastic, grinding recovery; Green bean
+0.5
-0.2
-0.5
-0.2
+0.1
in planta
epiphytic; Lima bean
+0.1
-0.1
-0.5
-0.2
+0.3
carbon source
L-Malic (C)
+0.2
-0.0
-0.1
+0.3
-0.5
in planta
apoplastic; Lima bean
+0.3
-0.3
-0.4
+0.2
+0.1
kb
KB
-0.4
+0.2
+0.3
-0.1
-0.1
in planta
apoplastic; Green bean; 13 days
-0.4
-0.3
+0.4
+0.4
-0.1
aphid
library passed through aphids in food, 72 hours
+0.1
+0.3
-0.4
+0.2
-0.0
stress
KB with Ginkgolide A 10 mM
+0.0
+0.3
-0.4
+0.1
+0.3
stress
KB with Paclitaxel 10 mM
-0.2
+0.1
+0.3
+0.2
-0.1
stress
KB with Isoliquiritigenin 10 mM
-0.2
+0.4
+0.2
+0.1
-0.1
stress
KB with Avocatin A 10 mM
+0.4
+0.3
+0.1
-0.2
-0.2
carbon source
a-Ketoglutaric (C)
+0.3
+0.1
+0.2
+0.0
-0.3
in planta
apoplastic, sonication recovery; Green bean
+0.4
+0.3
-0.7
+0.2
+0.2
stress
KB with Nonanoic 10 mM
+0.2
+0.3
+0.2
-0.0
-0.2
carbon source
Succinic Acid (C)
+0.2
-0.2
+0.1
+0.2
+0.1
in planta
apoplastic, sonication recovery; Green bean
+0.6
+0.2
-0.6
+0.3
+0.1
stress
KB with L-alliin 10 mM
+0.1
+0.4
+0.2
+0.1
+0.1
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.0
+0.2
+0.3
+0.3
+0.2
aphid
library passed through aphids in food, 72 hours
+0.3
+0.6
+0.3
-0.2
+0.4
remove
Psyr_3534
plot
remove
Psyr_3535
plot
remove
Psyr_3536
remove
Psyr_3537
plot
remove
Psyr_3538
plot