Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 193 experiments or choose conditions or try the comparative fitness browser

500 ntPsyr_3530 and Psyr_3531 are separated by 344 nucleotidesPsyr_3531 and Psyr_3532 are separated by 287 nucleotidesPsyr_3532 and Psyr_3533 are separated by 1 nucleotidesPsyr_3533 and Psyr_3534 are separated by 162 nucleotides Psyr_3530: Psyr_3530 - transcriptional regulator, GntR family, at 4,206,425 to 4,207,144 _3530 Psyr_3531: Psyr_3531 - Permease for cytosine/purines, uracil, thiamine, allantoin, at 4,207,489 to 4,208,940 _3531 Psyr_3532: Psyr_3532 - PAS, at 4,209,228 to 4,211,303 _3532 Psyr_3533: Psyr_3533 - conserved hypothetical protein, at 4,211,305 to 4,211,628 _3533 Psyr_3534: Psyr_3534 - Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer, at 4,211,791 to 4,213,680 _3534
Group Condition Psyr_3530 Psyr_3531 Psyr_3532 Psyr_3533 Psyr_3534
in planta apoplastic; Pepper -0.1 -0.2 -0.4 N.D. -0.3
carbon source 4-hydroxybutyric (C) -0.1 -0.4 -0.4 N.D. +0.0
in planta apoplastic, chopping recovery; Green bean -0.7 -0.1 -0.3 N.D. +0.2
in planta apoplastic; Pepper -0.3 -0.6 -0.1 N.D. +0.1
in planta epiphytic; Lima bean +0.1 -0.2 -0.4 N.D. -0.3
in planta epiphytic; Green bean -0.4 -0.1 -0.3 N.D. +0.1
in planta apoplastic; Lima bean -0.5 +0.1 -0.0 N.D. -0.3
in planta apoplastic; Lima bean -0.3 +0.1 -0.1 N.D. -0.3
in planta epiphytic; Lima bean +0.1 +0.1 -0.5 N.D. -0.1
in planta epiphytic; Green bean +0.4 -0.2 -0.3 N.D. -0.3
in planta apoplastic; Green bean; 13 days -0.3 +0.2 +0.1 N.D. -0.4
kb KB +0.3 +0.1 -0.3 N.D. -0.1
stress KB with Acridine orange 62.5 ug/ml +0.3 -0.2 +0.3 N.D. -0.3
in planta Green bean; epiphytic -0.4 -0.1 +0.4 N.D. +0.3
in planta epiphytic; Lima bean +0.4 -0.3 +0.2 N.D. -0.1
aphid library passed through aphids in food, 72 hours -0.5 +0.4 +0.0 N.D. +0.3
in planta apoplastic, sonication recovery; Green bean -0.2 +0.1 -0.3 N.D. +0.6
carbon source Succinic Acid (C) +0.4 -0.1 -0.2 N.D. +0.2
in planta apoplastic, sonication recovery; Green bean +0.2 +0.1 -0.3 N.D. +0.4
stress KB with Mitomycin C 0.625 ug/ml +1.0 -0.2 -0.1 N.D. -0.3
stress KB with Avocatin B 10 mM +0.5 +0.2 -0.0 N.D. -0.2
stress KB with Benzalkonium Chloride 6.25 ug/ml +0.6 -0.3 +0.3 N.D. -0.1
aphid library passed through aphids in food, 72 hours +0.8 -0.2 -0.0 N.D. +0.1
in planta apoplastic, grinding recovery; Green bean +0.7 +0.2 +0.1 N.D. -0.4
carbon source 4-Aminobutyric (C) +0.6 -0.1 -0.0 N.D. +0.2
in planta epiphytic; Lima bean +0.7 -0.2 +0.1 N.D. +0.1
in planta apoplastic, grinding recovery; Green bean +0.2 -0.2 +0.3 N.D. +0.5
stress KB with Dimethyl Sulfoxide 1.25 vol% +0.6 +0.1 +0.1 N.D. +0.1
carbon source a-Ketoglutaric (C) +0.7 -0.0 -0.0 N.D. +0.3
stress KB with Huperzine A 10 mM +0.5 +0.3 +0.2 N.D. +0.0
remove
Psyr_3530
plot		 remove
Psyr_3531
plot		 remove
Psyr_3532		 remove
Psyr_3533
plot		 remove
Psyr_3534
plot