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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3498 and Psyr_3499 are separated by 51 nucleotides
Psyr_3499 and Psyr_3500 are separated by 153 nucleotides
Psyr_3500 and Psyr_3501 are separated by 204 nucleotides
Psyr_3501 and Psyr_3502 are separated by 307 nucleotides
Psyr_3498: Psyr_3498 - Conserved hypothetical protein 730, at 4,168,112 to 4,169,518
_3498
Psyr_3499: Psyr_3499 - transcriptional regulator, AraC family, at 4,169,570 to 4,170,439
_3499
Psyr_3500: Psyr_3500 - 4-hydroxybenzoate 3-monooxygenase, at 4,170,593 to 4,171,777
_3500
Psyr_3501: Psyr_3501 - General substrate transporter:Major facilitator superfamily, at 4,171,982 to 4,173,307
_3501
Psyr_3502: Psyr_3502 - membrane protein, putative, at 4,173,615 to 4,177,013
_3502
Group
Condition
Psyr
_3498
Psyr
_3499
Psyr
_3500
Psyr
_3501
Psyr
_3502
carbon source
4-hydroxybutyric (C)
-1.1
-0.2
-0.2
-0.4
-0.3
in planta
apoplastic, grinding recovery; Green bean
+0.3
-1.1
-0.1
-0.0
+0.0
carbon source
D-Gluconic (C)
+0.0
-0.3
-0.1
-0.2
-0.3
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
-0.6
+0.1
-0.1
+0.0
-0.3
in planta
apoplastic, sonication recovery; Green bean
-0.5
+0.1
+0.1
-0.4
-0.1
stress
KB with Xanthyletin 10 mM
-0.2
-0.2
-0.1
+0.2
-0.3
in planta
apoplastic; Pepper
+0.4
-0.1
-0.0
-0.5
-0.3
in planta
epiphytic; Lima bean
-0.1
-0.6
-0.2
+0.4
+0.1
carbon source
4-Aminobutyric (C)
+0.0
+0.3
-0.5
+0.0
-0.2
stress
KB with Nalidixic 12.5 ug/ml
-0.4
+0.1
+0.0
+0.3
-0.3
in planta
apoplastic, grinding recovery; Green bean
+0.5
-0.5
+0.1
-0.3
-0.1
stress
KB with Oxonitine 10 mM
-0.1
-0.4
-0.1
+0.3
-0.1
in planta
apoplastic; Pepper
+0.3
-0.3
+0.1
-0.1
-0.2
carbon source
Citric Acid (C)
+0.3
+0.1
-0.2
-0.2
-0.1
stress
KB with Mitomycin C 0.625 ug/ml
-0.6
+0.4
-0.0
+0.8
-0.5
in planta
apoplastic; Green bean; 6 days
+0.2
+0.5
-0.3
-0.5
+0.2
in planta
apoplastic; Green bean; 13 days
-0.4
+0.2
-0.2
+0.2
+0.3
aphid
library passed through aphids in food, 72 hours
+0.2
+0.4
-0.1
-0.1
-0.1
in planta
apoplastic; Green bean; 6 days
+0.1
+0.6
-0.3
-0.3
+0.2
stress
KB with Acridine orange 62.5 ug/ml
-0.4
+0.2
-0.1
+1.0
-0.3
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.3
+0.1
+0.0
+0.9
-0.3
stress
MBOA 0.5 mM
+0.4
+0.3
-0.0
-0.1
-0.1
in planta
epiphytic; Lima bean
-0.4
+0.3
+0.2
+0.3
+0.1
stress
MBOA 1.2 mM
+0.3
+0.4
+0.0
-0.3
+0.0
stress
MBOA 0.5 mM
+0.3
+0.5
+0.1
-0.1
-0.1
stress
KB with Acriflavine 7.75 ug/ml
-0.1
+0.2
+0.2
+0.3
+0.1
aphid
library passed through aphids in food, 72 hours
+0.1
+0.1
+0.4
+0.4
-0.2
stress
MBOA 0.5 mM
+0.4
+0.2
+0.1
+0.2
-0.1
stress
KB with Harmol 10 mM
+0.3
+0.2
+0.3
+0.3
-0.0
aphid
library passed through aphids in food, 72 hours
+0.1
+0.8
+0.3
-0.0
+0.2
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