Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_3478 and Psyr_3479 are separated by 25 nucleotidesPsyr_3479 and Psyr_3480 are separated by 15 nucleotidesPsyr_3480 and Psyr_3481 are separated by 3 nucleotidesPsyr_3481 and Psyr_3482 are separated by 278 nucleotides Psyr_3478: Psyr_3478 - Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE, at 4,149,634 to 4,150,962 _3478 Psyr_3479: Psyr_3479 - Flagellar hook capping protein, at 4,150,988 to 4,151,677 _3479 Psyr_3480: Psyr_3480 - Flagellar basal-body rod protein FlgC, at 4,151,693 to 4,152,133 _3480 Psyr_3481: Psyr_3481 - Flagellar basal-body rod protein FlgB, at 4,152,137 to 4,152,544 _3481 Psyr_3482: Psyr_3482 - Protein of unknown function DUF1348, at 4,152,823 to 4,153,296 _3482
Group Condition Psyr_3478 Psyr_3479 Psyr_3480 Psyr_3481 Psyr_3482
aphid library passed through aphids in food, 72 hours -2.8 -0.5 -2.8 -1.3 -0.2
aphid library passed through aphids in food, 72 hours -1.5 -0.3 -2.1 -1.9 +0.2
aphid library passed through aphids in food, 24 hours -1.6 -0.6 -1.7 -1.8 +0.2
aphid library passed through aphids in food, 24 hours -1.2 -0.8 -1.6 -1.8 +0.0
aphid library passed through aphids in food, 24 hours -1.5 -1.0 -1.0 -1.6 +0.1
aphid library passed through aphids in food, 24 hours -1.4 -0.8 -1.2 -1.4 +0.1
aphid library passed through aphids in food, 72 hours -1.6 +0.0 -1.7 -1.7 +0.6
in planta apoplastic; Lima bean -0.0 -0.3 -1.1 -0.3 -0.7
in planta apoplastic, sonication recovery; Green bean -0.2 +0.2 -1.2 +0.1 -0.5
in planta apoplastic, sonication recovery; Green bean -0.0 +0.2 -1.3 -0.3 -0.2
in planta apoplastic, grinding recovery; Green bean +0.2 -0.9 +0.6 -0.4 -0.8
in planta apoplastic, chopping recovery; Green bean -0.4 -0.6 -0.1 -0.5 +0.5
carbon source 4-Aminobutyric (C) +0.3 -0.1 -1.0 -0.5 +0.3
carbon source Citric Acid (C) +0.2 -0.3 -0.6 -0.4 +0.5
in planta apoplastic; Green bean; 13 days +0.2 -0.1 +0.7 +0.5 -1.2
in planta apoplastic; Pepper +0.4 -0.5 +0.2 +0.6 -0.5
in planta epiphytic; Lima bean +0.1 +0.9 -0.0 +0.3 -1.1
in planta epiphytic; Lima bean +0.2 +1.0 -0.6 -0.2 -0.2
in planta apoplastic; Pepper +0.4 -0.2 +0.4 +0.6 -0.6
stress KB with Benzalkonium Chloride 6.25 ug/ml -0.2 +0.7 +1.2 -0.8 -0.2
in planta apoplastic, grinding recovery; Green bean +0.3 +0.6 +0.2 +0.4 -0.6
stress KB with Acridine orange 62.5 ug/ml -0.3 +1.0 +1.2 -0.3 -0.2
in planta apoplastic; Lima bean +0.3 -0.3 +0.8 +0.4 +0.3
in planta apoplastic; Pepper +0.5 +0.6 +0.4 +0.4 -0.4
in planta apoplastic; Pepper +0.7 +0.3 -0.5 +0.9 +0.2
stress KB with Mitomycin C 0.625 ug/ml -0.3 +1.2 +1.6 -0.4 -0.2
stress KB with Plumbagin 10 mM +0.1 +0.5 +0.8 +0.5 +0.1
stress KB with Myricetin 10 mM +0.4 +0.4 +0.9 +0.2 +0.2
in planta apoplastic; Pepper +0.7 +0.6 -0.3 +1.0 +0.0
in planta apoplastic; Pepper +0.6 +1.0 +0.6 +0.4 -0.2
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