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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3443 and Psyr_3444 are separated by 25 nucleotides
Psyr_3444 and Psyr_3445 overlap by 1 nucleotides
Psyr_3445 and Psyr_3446 are separated by 0 nucleotides
Psyr_3446 and Psyr_3447 are separated by 61 nucleotides
Psyr_3443: Psyr_3443 - Flagellar biosynthesis protein FliQ, at 4,107,991 to 4,108,260
_3443
Psyr_3444: Psyr_3444 - Flagellar transport protein FliP, at 4,108,286 to 4,109,038
_3444
Psyr_3445: Psyr_3445 - Flagellar biosynthesis protein, FliO, at 4,109,038 to 4,109,478
_3445
Psyr_3446: Psyr_3446 - Surface presentation of antigens (SPOA) protein, at 4,109,479 to 4,109,937
_3446
Psyr_3447: Psyr_3447 - Flagellar motor switch protein FliM, at 4,109,999 to 4,110,967
_3447
Group
Condition
Psyr
_3443
Psyr
_3444
Psyr
_3445
Psyr
_3446
Psyr
_3447
aphid
library passed through aphids in food, 72 hours
-2.5
N.D.
-3.6
-2.7
-2.4
aphid
library passed through aphids in food, 72 hours
-2.4
N.D.
-1.8
-3.0
-3.0
aphid
library passed through aphids in food, 72 hours
-2.8
N.D.
-0.2
-4.0
-2.6
aphid
library passed through aphids in food, 24 hours
-1.3
N.D.
-2.6
-1.7
-1.6
aphid
library passed through aphids in food, 24 hours
-1.0
N.D.
-1.7
-1.6
-2.2
aphid
library passed through aphids in food, 24 hours
-1.5
N.D.
-1.8
-1.7
-1.4
aphid
library passed through aphids in food, 24 hours
-1.5
N.D.
-1.9
-1.0
-1.7
in planta
apoplastic, chopping recovery; Green bean
-1.3
N.D.
-0.1
-1.4
-0.5
in planta
apoplastic; Lima bean
-0.7
N.D.
-1.1
-0.3
-0.1
in planta
apoplastic; Green bean; 13 days
+0.1
N.D.
-0.1
-2.0
-0.1
stress
KB with Dihydrodehydroerosone 10 mM
-0.3
N.D.
+0.0
-1.2
-0.3
carbon source
L-Proline (C)
+0.0
N.D.
-0.4
-1.2
+0.2
stress
KB with Mitomycin C 0.625 ug/ml
-0.8
N.D.
-0.8
+0.3
-0.2
in planta
apoplastic; Green bean; 6 days
+0.1
N.D.
+1.0
-0.7
-0.2
carbon source
Glycerol (C)
+0.5
N.D.
+0.8
-0.9
+0.2
in planta
apoplastic, grinding recovery; Green bean
-0.1
N.D.
+1.0
-0.5
+0.5
in planta
apoplastic; Pepper
+0.3
N.D.
+0.8
+0.1
+0.8
carbon source
4-hydroxybutyric (C)
+0.7
N.D.
+0.7
-0.3
+1.0
in planta
epiphytic; Green bean
+0.9
N.D.
+0.6
-0.0
+0.9
in planta
epiphytic; Green bean
+0.6
N.D.
+0.6
+0.3
+0.9
in planta
epiphytic; Lima bean
+0.9
N.D.
+0.3
+1.2
+0.2
in planta
epiphytic; Green bean
+0.3
N.D.
+0.6
+1.2
+0.4
in planta
epiphytic; Lima bean
+0.8
N.D.
-0.0
+1.3
+0.5
in planta
apoplastic; Pepper
+0.3
N.D.
+1.0
+0.1
+1.1
in planta
apoplastic; Pepper
+0.7
N.D.
+0.7
+0.8
+0.4
in planta
apoplastic; Pepper
+0.7
N.D.
+0.5
+1.2
+0.3
in planta
apoplastic; Pepper
+0.7
N.D.
+1.5
+0.9
+0.5
in planta
apoplastic; Pepper
+0.8
N.D.
+1.4
+1.3
+0.4
in planta
Green bean; epiphytic
+1.3
N.D.
+1.5
+1.2
+1.1
in planta
Green bean; epiphytic
+1.4
N.D.
+1.4
+1.4
+1.0
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