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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3406 and Psyr_3407 are separated by 728 nucleotides
Psyr_3407 and Psyr_3408 are separated by 63 nucleotides
Psyr_3408 and Psyr_3409 are separated by 417 nucleotides
Psyr_3409 and Psyr_3410 are separated by 50 nucleotides
Psyr_3406: Psyr_3406 - PAS, at 4,066,069 to 4,067,634
_3406
Psyr_3407: Psyr_3407 - conserved hypothetical protein, at 4,068,363 to 4,068,908
_3407
Psyr_3408: Psyr_3408 - Outer membrane autotransporter barrel, at 4,068,972 to 4,071,101
_3408
Psyr_3409: Psyr_3409 - conserved hypothetical protein, at 4,071,519 to 4,073,348
_3409
Psyr_3410: Psyr_3410 - hypothetical protein, at 4,073,399 to 4,076,032
_3410
Group
Condition
Psyr
_3406
Psyr
_3407
Psyr
_3408
Psyr
_3409
Psyr
_3410
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.2
-0.5
-0.4
-0.3
-0.3
stress
KB with Acridine orange 62.5 ug/ml
-0.0
-0.3
-0.5
-0.4
-0.4
stress
KB with Aristolochic Acid 10 mM
-0.2
-0.5
-0.1
-0.3
-0.3
in planta
apoplastic, grinding recovery; Green bean
-0.4
-1.0
+0.0
-0.1
-0.1
stress
KB with Novobiocin 250 ug/ml
-0.4
-0.4
-0.1
-0.0
-0.3
stress
KB with Leucodin 10 mM
-0.5
-0.2
-0.1
-0.3
-0.1
in planta
apoplastic; Pepper
-0.1
-0.5
-0.2
-0.1
-0.1
stress
KB with Myricetin 10 mM
-0.2
-0.2
-0.2
-0.3
-0.1
stress
KB with Rifampicin 0.1 mg/ml
-0.3
-0.2
-0.1
-0.1
-0.2
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.2
-0.5
+0.0
-0.2
-0.0
in planta
apoplastic; Pepper
-0.1
-0.5
-0.1
-0.1
-0.1
stress
KB with Harmalol 10 mM
-0.0
-0.4
-0.2
-0.1
-0.2
stress
KB with Quercetin 360 ug/ml
-0.2
-0.2
+0.0
-0.3
-0.2
in planta
apoplastic, sonication recovery; Green bean
-0.1
-0.6
-0.1
-0.1
+0.0
stress
KB with Nalidixic 12.5 ug/ml
-0.2
+0.1
-0.2
-0.2
-0.4
in planta
apoplastic, grinding recovery; Green bean
-0.5
-0.3
+0.1
-0.1
+0.0
in planta
apoplastic, chopping recovery; Green bean
-0.3
-0.3
-0.2
+0.1
+0.1
stress
KB with Mitomycin C 0.625 ug/ml
+0.1
+0.5
-0.3
-0.5
-0.5
stress
KB with Methanol 5 vol%
+0.1
-0.4
+0.1
-0.1
-0.2
stress
KB with Sclareolide 10 mM
+0.0
-0.7
+0.1
+0.0
-0.1
stress
KB with Veratrine 10 mM
+0.1
-0.6
+0.1
-0.2
-0.0
stress
KB with Avocadene 10 mM
-0.2
+0.2
+0.0
-0.4
-0.0
aphid
library passed through aphids in food, 24 hours
-0.5
-0.2
+0.2
+0.2
+0.0
in planta
apoplastic; Pepper
-0.2
+0.3
+0.0
-0.4
-0.1
in planta
epiphytic; Green bean
-0.2
-0.4
-0.0
+0.4
-0.0
carbon source
Succinic Acid (C)
-0.1
+0.5
+0.1
-0.3
-0.1
aphid
library passed through aphids in food, 72 hours
-0.7
+0.3
+0.2
+0.0
+0.2
stress
KB with dihydrojasmonic, methyl ester 10 mM
+0.5
-0.3
+0.1
-0.0
-0.1
in planta
apoplastic; Green bean; 13 days
-0.6
+0.7
-0.3
+0.4
+0.0
in planta
epiphytic; Lima bean
-0.4
+0.5
-0.1
+0.2
-0.0
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