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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3396 and Psyr_3397 are separated by 110 nucleotides
Psyr_3397 and Psyr_3398 are separated by 96 nucleotides
Psyr_3398 and Psyr_3399 overlap by 11 nucleotides
Psyr_3399 and Psyr_3400 are separated by 13 nucleotides
Psyr_3396: Psyr_3396 - DNA replication and repair protein RecR, at 4,053,568 to 4,054,170
_3396
Psyr_3397: Psyr_3397 - transcriptional regulator, LysR family, at 4,054,281 to 4,055,165
_3397
Psyr_3398: Psyr_3398 - Alanine racemase, N-terminal, at 4,055,262 to 4,056,398
_3398
Psyr_3399: Psyr_3399 - Endoribonuclease L-PSP, at 4,056,388 to 4,056,786
_3399
Psyr_3400: Psyr_3400 - FAD dependent oxidoreductase, at 4,056,800 to 4,057,984
_3400
Group
Condition
Psyr
_3396
Psyr
_3397
Psyr
_3398
Psyr
_3399
Psyr
_3400
stress
KB with Nitrofurantoin 0.25 mg/ml
-3.7
+0.3
+0.1
-0.0
-0.1
stress
KB with Nitrofurantoin 125 ug/ml
-2.7
-0.0
-0.0
+0.2
-0.0
in planta
apoplastic; Lima bean
-0.3
-0.8
-0.2
-0.2
+0.1
in planta
epiphytic; Green bean
-0.7
-0.7
-0.4
-0.2
+0.6
in planta
epiphytic; Lima bean
-0.7
-0.4
+0.1
+0.1
-0.2
in planta
apoplastic; Green bean; 13 days
-0.4
+0.1
-1.2
+1.1
-0.5
aphid
library passed through aphids in food, 72 hours
-0.9
-0.3
-0.2
-0.2
+0.7
in planta
epiphytic; Green bean
-0.8
+0.1
-0.2
+0.2
+0.2
stress
KB with Mitomycin C 0.625 ug/ml
-2.0
+0.9
+0.6
-0.5
+0.6
carbon source
L-Proline (C)
-0.4
+0.6
+0.1
-0.2
-0.4
in planta
apoplastic, grinding recovery; Green bean
-0.3
-0.1
+0.3
-0.5
+0.4
carbon source
4-hydroxybutyric (C)
-0.5
+0.5
+0.1
+0.0
-0.3
in planta
apoplastic; Lima bean
-0.4
-0.3
-0.2
+0.6
+0.2
in planta
epiphytic; Lima bean
+0.1
+0.7
+0.3
-0.4
-0.7
in planta
apoplastic, chopping recovery; Green bean
+0.8
-0.0
+0.2
-1.0
-0.0
stress
KB with Myricetin 10 mM
-0.5
+0.2
-0.1
+0.6
+0.1
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.4
+0.2
-0.2
+0.7
-0.1
in planta
apoplastic; Lima bean
+0.3
+0.1
-0.5
+0.3
+0.3
stress
KB with Quercetin 360 ug/ml
-0.4
-0.1
+0.1
+0.6
+0.3
aphid
library passed through aphids in food, 72 hours
+0.6
+0.4
+0.2
-0.1
-0.2
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.4
+1.5
-0.1
-0.5
+0.4
in planta
apoplastic; Lima bean
+0.3
+0.3
-0.5
+0.5
+0.4
stress
KB with Acridine orange 62.5 ug/ml
-0.5
+1.1
+0.2
-0.2
+0.3
stress
KB with Fusaric 250 ug/ml
-0.3
+0.3
+0.3
+0.5
+0.2
stress
KB with Naringin 250 ug/ml
-0.2
+0.3
+0.3
+0.6
+0.2
stress
KB with Isovanillin 10 mM
+0.5
+0.3
+0.1
+0.6
-0.3
in planta
apoplastic, sonication recovery; Green bean
+0.2
+0.8
-0.4
+0.4
+0.4
in planta
apoplastic; Pepper
+0.6
-0.1
+0.4
+0.3
+0.2
in planta
apoplastic, grinding recovery; Green bean
-0.0
+0.4
+0.1
+0.9
+0.2
in planta
apoplastic, sonication recovery; Green bean
+0.1
+0.9
-0.2
-0.0
+0.6
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