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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3353 and Psyr_3354 are separated by 61 nucleotides
Psyr_3354 and Psyr_3355 are separated by 12 nucleotides
Psyr_3355 and Psyr_3356 are separated by 369 nucleotides
Psyr_3356 and Psyr_3357 are separated by 109 nucleotides
Psyr_3353: Psyr_3353 - Catalase, at 4,010,342 to 4,011,874
_3353
Psyr_3354: Psyr_3354 - Ankyrin, at 4,011,936 to 4,012,505
_3354
Psyr_3355: Psyr_3355 - PAS, at 4,012,518 to 4,014,458
_3355
Psyr_3356: Psyr_3356 - conserved hypothetical protein, at 4,014,828 to 4,015,052
_3356
Psyr_3357: Psyr_3357 - transcriptional regulator, LysR family, at 4,015,162 to 4,016,046
_3357
Group
Condition
Psyr
_3353
Psyr
_3354
Psyr
_3355
Psyr
_3356
Psyr
_3357
stress
KB with Plumbagin 10 mM
-0.4
-0.6
-0.1
N.D.
-1.1
stress
KB with Gossypetin 10 mM
-0.1
-0.4
-0.2
N.D.
-1.1
stress
KB with Avocatin B 10 mM
-0.2
-0.4
-0.3
N.D.
-0.7
stress
KB with Piperic 10 mM
-0.1
-0.7
-0.1
N.D.
-0.8
stress
KB with Harmol 10 mM
-0.0
-0.4
-0.2
N.D.
-1.0
kb
KB
-0.3
-0.1
-0.1
N.D.
-1.1
stress
KB with Paclitaxel 10 mM
-0.6
-0.3
-0.1
N.D.
-0.6
stress
KB with 4-hydroxychalcone 10 mM
-0.2
-0.1
-0.2
N.D.
-1.0
stress
KB with Veratrine 10 mM
-0.3
-0.6
-0.3
N.D.
-0.4
stress
KB with Sclareolide 10 mM
-0.2
-0.4
-0.3
N.D.
-0.7
in planta
apoplastic; Pepper
-0.1
-0.1
-0.3
N.D.
-1.0
stress
KB with Chaulmoogric 10 mM
-0.1
-0.6
-0.2
N.D.
-0.6
stress
KB with Totarol 10 mM
-0.1
-0.5
-0.3
N.D.
-0.5
stress
KB with Physcion 10 mM
-0.3
-0.5
-0.1
N.D.
-0.4
stress
KB with L-alliin 10 mM
-0.3
-0.6
-0.0
N.D.
-0.4
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.4
-0.3
-0.2
N.D.
-0.5
in planta
apoplastic, grinding recovery; Green bean
+0.3
-0.9
-0.1
N.D.
+0.1
in planta
apoplastic; Lima bean
-0.3
-0.3
-0.2
N.D.
+0.6
in planta
apoplastic, chopping recovery; Green bean
+0.1
-0.7
-0.1
N.D.
+0.4
stress
KB with Harmalol 10 mM
-0.2
+0.4
-0.4
N.D.
+0.5
in planta
apoplastic; Lima bean
-0.1
-0.3
-0.1
N.D.
+1.2
in planta
apoplastic; Green bean; 13 days
+0.3
-0.5
+0.5
N.D.
+0.4
in planta
epiphytic; Green bean
-0.0
+0.9
-0.2
N.D.
+0.5
in planta
apoplastic; Pepper
+0.1
+0.8
+0.1
N.D.
+0.4
stress
KB with Mitomycin C 0.625 ug/ml
+0.1
+0.1
+0.5
N.D.
+0.7
in planta
apoplastic; Pepper
+0.2
+0.6
-0.1
N.D.
+0.8
stress
KB with Acridine orange 62.5 ug/ml
+0.3
+0.4
+0.3
N.D.
+0.5
carbon source
D-Mannose (C)
+0.2
+0.7
+0.1
N.D.
+0.6
aphid
library passed through aphids in food, 72 hours
+0.0
+1.0
+0.2
N.D.
+0.5
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.2
+0.2
+0.6
N.D.
+0.7
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