Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_3325 and Psyr_3326 overlap by 1 nucleotidesPsyr_3326 and Psyr_3327 are separated by 141 nucleotidesPsyr_3327 and Psyr_3328 are separated by 1 nucleotidesPsyr_3328 and Psyr_3329 are separated by 291 nucleotides Psyr_3325: Psyr_3325 - fumarylacetoacetate hydrolase, at 3,976,500 to 3,977,795 _3325 Psyr_3326: Psyr_3326 - homogentisate 1,2-dioxygenase, at 3,977,795 to 3,979,099 _3326 Psyr_3327: Psyr_3327 - transcriptional regulator, IclR family, at 3,979,241 to 3,980,032 _3327 Psyr_3328: Psyr_3328 - GGDEF domain protein, at 3,980,034 to 3,981,680 _3328 Psyr_3329: Psyr_3329 - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s), at 3,981,972 to 3,984,170 _3329
Group Condition Psyr_3325 Psyr_3326 Psyr_3327 Psyr_3328 Psyr_3329
in planta Green bean; epiphytic -0.5 -0.2 -0.5 -0.2 +0.1
in planta apoplastic; Pepper -0.4 -0.4 -0.0 -0.3 -0.2
in planta apoplastic; Green bean; 6 days -0.2 -0.1 -0.5 -0.2 -0.1
in planta apoplastic; Green bean; 6 days -0.2 +0.3 -0.7 -0.1 -0.3
kb KB -0.1 -0.3 -0.5 -0.2 +0.1
in planta epiphytic; Green bean -0.2 -0.2 -0.2 +0.0 -0.2
stress KB with Mitomycin C 0.625 ug/ml +0.0 -0.7 +0.3 -0.5 -0.0
stress KB with Rotenone 0.25 mg/ml -0.0 -0.4 -0.4 -0.1 +0.0
in planta epiphytic; Green bean -0.4 -0.2 -0.2 -0.0 +0.0
in planta apoplastic; Lima bean -0.0 -0.4 -0.4 -0.1 +0.2
carbon source Sucrose (C) +0.2 -0.1 -0.4 -0.2 -0.2
in planta apoplastic, grinding recovery; Green bean -0.8 +0.0 +0.0 -0.1 +0.1
in planta apoplastic; Lima bean +0.1 -0.3 -0.6 -0.1 +0.2
stress KB with capsaicin 0.25 mg/ml -0.3 -0.2 -0.2 -0.1 +0.1
stress KB with Flavone 0.125 mg/ml -0.1 -0.2 -0.3 -0.3 +0.2
in planta Green bean; epiphytic -0.4 -0.2 -0.0 -0.2 +0.2
carbon source L-Proline (C) +0.2 -0.2 -0.1 -0.1 -0.2
stress KB with Rifampicin 0.1 mg/ml -0.2 -0.2 -0.0 -0.3 +0.2
stress KB with Isovanillin 10 mM +0.2 -0.2 -0.4 -0.2 +0.0
stress KB with Benzalkonium Chloride 6.25 ug/ml -0.1 +0.1 +0.1 -0.3 -0.2
in planta apoplastic; Pepper -0.2 -0.5 +0.5 -0.0 -0.1
in planta apoplastic; Pepper -0.2 -0.2 +0.3 +0.0 -0.1
in planta apoplastic, sonication recovery; Green bean -0.4 +0.3 -0.0 +0.0 +0.2
stress KB with Novobiocin 250 ug/ml +0.1 -0.3 +0.3 -0.0 -0.0
in planta epiphytic; Lima bean -0.0 +0.4 -0.4 +0.0 +0.2
in planta apoplastic, sonication recovery; Green bean -0.4 +0.5 +0.1 +0.0 +0.2
stress KB with Nalidixic 12.5 ug/ml +0.3 -0.1 +0.4 -0.2 +0.0
stress KB with Plumbagin 10 mM +0.0 +0.0 +0.6 +0.0 -0.2
in planta apoplastic; Lima bean +0.1 -0.1 +0.4 +0.1 +0.1
aphid library passed through aphids in food, 72 hours +0.5 +0.4 -0.5 +0.1 +0.3
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