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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_3300 and Psyr_3301 are separated by 522 nucleotides
Psyr_3301 and Psyr_3302 overlap by 1 nucleotides
Psyr_3302 and Psyr_3303 are separated by 132 nucleotides
Psyr_3303 and Psyr_3304 are separated by 17 nucleotides
Psyr_3300: Psyr_3300 - Conserved hypothetical protein 147, at 3,948,347 to 3,949,264
_3300
Psyr_3301: Psyr_3301 - Undecaprenyl-phosphate galactosephosphotransferase, at 3,949,787 to 3,951,223
_3301
Psyr_3302: Psyr_3302 - mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP), at 3,951,223 to 3,952,680
_3302
Psyr_3303: Psyr_3303 - Polysaccharide export protein, at 3,952,813 to 3,953,592
_3303
Psyr_3304: Psyr_3304 - Lipopolysaccharide biosynthesis, at 3,953,610 to 3,955,601
_3304
Group
Condition
Psyr
_3300
Psyr
_3301
Psyr
_3302
Psyr
_3303
Psyr
_3304
aphid
library passed through aphids in food, 72 hours
+0.4
-2.7
-1.3
-2.3
-2.2
aphid
library passed through aphids in food, 72 hours
-0.4
-1.8
-1.0
-2.2
-1.7
aphid
library passed through aphids in food, 72 hours
+0.1
-1.0
-0.8
-1.1
-0.7
in planta
apoplastic, sonication recovery; Green bean
-1.7
+0.6
-0.4
+0.6
-0.1
aphid
library passed through aphids in food, 24 hours
-0.2
-0.2
+0.2
-0.3
-0.2
in planta
apoplastic, grinding recovery; Green bean
-1.4
+0.3
-0.3
+0.7
+0.2
in planta
apoplastic, sonication recovery; Green bean
-1.3
+0.7
-0.2
+0.7
-0.2
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
+0.2
-0.5
+0.0
+0.2
-0.3
in planta
apoplastic; Pepper
-0.2
-0.2
-0.3
+0.1
+0.3
stress
KB with Fusaric 250 ug/ml
+0.2
-0.3
-0.2
-0.1
+0.4
carbon source
4-Aminobutyric (C)
-0.1
+0.2
-0.4
+0.1
+0.3
stress
KB with Harmalol 10 mM
+0.5
-0.2
+0.2
-0.2
-0.2
in planta
apoplastic, chopping recovery; Green bean
+0.1
-0.1
+0.2
+0.4
-0.3
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.8
+0.1
+1.0
+0.2
-0.2
stress
KB with Resveratrol 10 mM
+0.4
-0.2
+0.3
-0.2
+0.1
stress
KB with Chaulmoogric 10 mM
-0.1
+0.2
+0.3
-0.2
+0.3
stress
KB with Acridine orange 62.5 ug/ml
-0.7
-0.0
+1.0
+0.5
-0.2
stress
KB with Gossypetin 10 mM
+0.3
+0.2
+0.4
-0.3
+0.0
in planta
epiphytic; Lima bean
+0.1
+0.5
-0.5
+0.4
+0.2
stress
KB with Levodopa 10 mM
+0.4
-0.1
+0.2
+0.2
+0.1
in planta
epiphytic; Green bean
-0.1
+0.3
+0.1
-0.0
+0.6
stress
KB with Mitomycin C 0.625 ug/ml
-0.5
-0.1
+1.2
+0.6
-0.2
in planta
epiphytic; Lima bean
+0.2
+0.1
+0.3
+0.3
+0.2
carbon source
4-hydroxybutyric (C)
+0.5
+0.1
+0.1
+0.1
+0.3
in planta
epiphytic; Green bean
+0.2
+0.4
+0.2
+0.5
+0.1
in planta
epiphytic; Green bean
+0.3
+0.4
+0.1
+0.1
+0.5
in planta
Green bean; epiphytic
-0.1
+0.5
+0.2
+0.4
+0.5
in planta
epiphytic; Lima bean
+0.2
+0.3
+0.3
+0.3
+0.4
in planta
Green bean; epiphytic
+0.2
+0.5
+0.4
+0.0
+0.5
in planta
epiphytic; Lima bean
+0.5
+0.3
+0.5
+0.0
+0.2
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